RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CCDC36Q8IYA8 594 aa15.39■□□□□ 0.05
GNE-204ENST00000539208 NANOS1Q8WY41 292 aaKnown RBP15.39■□□□□ 0.05
GNE-204ENST00000539208 EXTL1Q92935 676 aa15.39■□□□□ 0.05
GNE-204ENST00000539208 HIST1H2AAQ96QV6 131 aa15.39■□□□□ 0.05
GNE-204ENST00000539208 FAM86C1Q9NVL1 165 aa15.39■□□□□ 0.05
GNE-204ENST00000539208 SPRR3Q9UBC9 169 aa15.39■□□□□ 0.05
GNE-204ENST00000539208 NCOR1O75376 2440 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 SLC22A20A6NK97 555 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 S100A10P60903 97 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 SPEM2Q0P670 501 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 CLN3Q13286 438 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 TFAP2EQ6VUC0 442 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 STPG2Q8N412 459 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 OR5P3Q8WZ94 311 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 MRPL24Q96A35 216 aaKnown RBP15.38■□□□□ 0.05
GNE-204ENST00000539208 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 MTCH1Q9NZJ7 389 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 MPC1Q9Y5U8 109 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 NAPSAO96009 420 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 EIF5AP63241 154 aaKnown RBP15.38■□□□□ 0.05
GNE-204ENST00000539208 ZNF585AQ6P3V2 769 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 UQCC3Q6UW78 93 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 OR5L1Q8NGL2 311 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 RNF141Q8WVD5 230 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 PLK3Q9H4B4 646 aa15.38■□□□□ 0.05
GNE-204ENST00000539208 ZNF552Q9H707 407 aaPredicted RBP15.38■□□□□ 0.05
GNE-204ENST00000539208 KNTC1P50748 2209 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 RAB19A4D1S5 217 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 TRAPPC2LH3BP13 241 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 DEDDO75618 318 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 OR5AC1P0C628 307 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 HKR1P10072 659 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 WNT5AP41221 380 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 FXYD4P59646 89 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 HIKESHIQ53FT3 197 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 LIAT1Q6ZQX7 453 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 LINC00596Q86U02 117 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 CCDC71LQ8N9Z2 235 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 MARC2Q969Z3 335 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 C12orf49Q9H741 205 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 ZNF629Q9UEG4 869 aaPredicted RBP15.37■□□□□ 0.05
GNE-204ENST00000539208 ARHGAP21Q5T5U3 1957 aa15.37■□□□□ 0.05
GNE-204ENST00000539208 CDRT15L2A8MXV6 281 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 ZNHIT1O43257 154 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 TNFSF10P50591 281 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 HERV-K104P61576 105 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 SMCO1Q147U7 214 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 GTF3AQ92664 365 aaKnown RBP15.36■□□□□ 0.05
GNE-204ENST00000539208 C18orf12Q96KH6 178 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 Q9N2K0 584 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 PCDHB10Q9UN67 800 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 SPEF1Q9Y4P9 236 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 ZNF407Q9C0G0 2248 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 OR5B21A6NL26 309 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 ANKRD30BLA7E2S9 258 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 H7C1Q1 480 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 J3QW42 95 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 ZNF205O95201 554 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 PPYP01298 95 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 AADACP22760 399 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 FAM185AQ8N0U4 392 aa15.36■□□□□ 0.05
GNE-204ENST00000539208 MSI2Q96DH6 328 aaKnown RBP15.36■□□□□ 0.05
GNE-204ENST00000539208 GMPPAQ96IJ6 420 aaPredicted RBP15.36■□□□□ 0.05
GNE-204ENST00000539208 NUDT19A8MXV4 375 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 FAM157CP0CG43 387 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 SP6Q3SY56 376 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 ZNF573Q86YE8 665 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 LGI3Q8N145 548 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 SUMF1Q8NBK3 374 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 OR1S2Q8NGQ3 325 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 GLYATL2Q8WU03 294 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 HS3ST6Q96QI5 342 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 PRRX2Q99811 253 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 GLRX2Q9NS18 164 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
GNE-204ENST00000539208 RPL12P30050 165 aaKnown RBP15.35■□□□□ 0.05
GNE-204ENST00000539208 PHLDA2Q53GA4 152 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 MDP1Q86V88 176 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 BATF2Q8N1L9 274 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 RIMS4Q9H426 269 aaPredicted RBP15.35■□□□□ 0.05
GNE-204ENST00000539208 PLEKHA2Q9HB19 425 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 SPACA1Q9HBV2 294 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 ZFP57Q9NU63 452 aa15.35■□□□□ 0.05
GNE-204ENST00000539208 K7EPK0 472 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 GNG3P63215 75 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 IL24Q13007 206 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 IGSF11Q5DX21 431 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 EIF5AL1Q6IS14 154 aaKnown RBP15.34■□□□□ 0.05
GNE-204ENST00000539208 FAM71E2Q8N5Q1 922 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 TMED6Q8WW62 240 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 PKIBQ9C010 78 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 PCNX2A6NKB5 2137 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 DNAJC13O75165 2243 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 BET1O15155 118 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 SYNGR1O43759 233 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 LRP3O75074 770 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 GLAP06280 429 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 LDLRAD3Q86YD5 345 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 RHOFQ9HBH0 211 aa15.34■□□□□ 0.05
GNE-204ENST00000539208 ASF1BQ9NVP2 202 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms