RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 MPV17LQ2QL34 196 aa11.94□□□□□ -0.5
SH3TC1-225ENST00000515682 ZNF880Q6PDB4 577 aa11.94□□□□□ -0.5
SH3TC1-225ENST00000515682 WDR5BQ86VZ2 330 aa11.94□□□□□ -0.5
SH3TC1-225ENST00000515682 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
SH3TC1-225ENST00000515682 TMEM100Q9NV29 134 aa11.94□□□□□ -0.5
SH3TC1-225ENST00000515682 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 ADAM20O43506 726 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 RNF4P78317 190 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 SRPXP78539 464 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 H3F3AP84243 136 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 RTBDNQ9BSG5 229 aaPredicted RBP11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 PLEKHF2Q9H8W4 249 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 RAMP1O60894 148 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 ISG15P05161 165 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 TMEM50BP56557 158 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 RNF144BQ7Z419 303 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 C9orf40Q8IXQ3 194 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 OR1N1Q8NGS0 311 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 TCAPO15273 167 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 MMP9P14780 707 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 AADACP22760 399 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 NOVA1P51513 510 aaKnown RBP11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 ZNF100Q8IYN0 542 aa11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
SH3TC1-225ENST00000515682 FCGR3AP08637 254 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 ARF1P84077 181 aaKnown RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 LHX4Q969G2 390 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 BSCL2Q96G97 398 aaPredicted RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 FAM206AQ9NX38 181 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 COL4A4P53420 1690 aaPredicted RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 GJE1A6NN92 205 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 DANCRP0C864 163 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 DYNLT3P51808 116 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 RPS23P62266 143 aaKnown RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 IL13RA2Q14627 380 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 CYB5R2Q6BCY4 276 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 FAM166AQ6J272 317 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 C1QL2Q7Z5L3 287 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 FAM185AQ8N0U4 392 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 OR52M1Q8NGK5 317 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 A0A1W2PR80 420 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 SPINK2P20155 84 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 DDTP30046 118 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.92□□□□□ -0.5
SH3TC1-225ENST00000515682 ZNF154Q13106 437 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 SPANXN5Q5MJ07 72 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 TIMM10BQ9Y5J6 103 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 CD5P06127 495 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 PNLIPP16233 465 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 EXT1Q16394 746 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 SLC35G3Q8N808 338 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 TNFSF15O95150 251 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 CLDN1O95832 211 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 THBS4P35443 961 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 PLP2Q04941 152 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 CDCP2Q5VXM1 449 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 SLC25A26Q70HW3 274 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 PP6455Q8WZ26 134 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 TWSG1Q9GZX9 223 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 DNAJC13O75165 2243 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 A0A0C4DFX4 3053 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 DHRS3O75911 302 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 PATE4P0C8F1 98 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 RND3P61587 244 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 PKIAP61925 76 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 LIPHQ8WWY8 451 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 DENND4CQ5VZ89 1909 aa11.91□□□□□ -0.5
SH3TC1-225ENST00000515682 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 ANKUB1A6NFN9 424 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 NRASP01111 189 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 PGA5P0DJD9 388 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 PMS2CLQ68D20 193 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 ASPHD2Q6ICH7 369 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 FLVCR1-AS1Q8TAF5 88 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 ZDHHC8Q9ULC8 765 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 MS4A18H0YCH9 400 aa11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 PTBP3O95758 552 aaKnown RBP11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 SUPT4H1P63272 117 aaKnown RBP11.9□□□□□ -0.5
SH3TC1-225ENST00000515682 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms