RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RILPQ96NA2 401 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 CCDC77Q9BR77 488 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF251Q9BRH9 671 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 ELOVL6Q9H5J4 265 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 PLEKHA1Q9HB21 404 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 MRPS30Q9NP92 439 aaKnown RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 SDHAF3Q9NRP4 125 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TAS2R9Q9NYW1 312 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 DOK5Q9P104 306 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TFR2Q9UP52 801 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 FLVCR2Q9UPI3 526 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 C14orf166Q9Y224 244 aaKnown RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM131Q92545 1883 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 NOS1P29475 1434 aa0.28□□□□□ -2.37
CCDC93-209ENST00000488908 IGLV3-9A0A075B6K5 115 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 A0A075B6Q4 140 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 SYNJ2BP-COX16A0A087WUM0 186 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 SLC5A10A0PJK1 596 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 OR5H14A6NHG9 310 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 LRRIQ4A6NIV6 560 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 SLC22A20A6NK97 555 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 MPHOSPH10O00566 681 aaKnown RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 TRDMT1O14717 391 aaKnown RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 GYG2O15488 501 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 RNF113AO15541 343 aaKnown RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 EEF1E1O43324 174 aaKnown RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 TRAPPC3O43617 180 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF189O75820 626 aaPredicted RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 GYPCP04921 128 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 RHOCP08134 193 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 RALBP11234 206 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CPMP14384 443 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 GSTM3P21266 225 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CLDN18P56856 261 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 ZCWPW2Q504Y3 356 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 NIPAL1Q6NVV3 410 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 Q6ZRN7 208 aaPredicted RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 KIF2BQ8N4N8 673 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 FER1L6-AS1Q8NA97 138 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 TMBIM1Q969X1 311 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CMBLQ96DG6 245 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 QKIQ96PU8 341 aaKnown RBP eCLIP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 PANX1Q96RD7 426 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 METTL26Q96S19 204 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 RETNLBQ9BQ08 111 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 ARL6Q9H0F7 186 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CYSTM1Q9H1C7 97 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CLSTN2Q9H4D0 955 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 WDR55Q9H6Y2 383 aaPredicted RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 VPS37BQ9H9H4 285 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 SLC23A2Q9UGH3 650 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 TBC1D24Q9ULP9 559 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CFL2Q9Y281 166 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 KLF12Q9Y4X4 402 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF706Q9Y5V0 76 aaPredicted RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF469Q96JG9 3925 aaPredicted RBP0.27□□□□□ -2.37
CCDC93-209ENST00000488908 RGS12O14924 1447 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 CEP170Q5SW79 1584 aa0.27□□□□□ -2.37
CCDC93-209ENST00000488908 IGHV1-45A0A0A0MS14 117 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 MUC21A0A0G2JKD1 596 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 A0A0J9YX75 114 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 MUC21A0A140T8X8 626 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 OR2AT4A6NND4 320 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 LECT2O14960 151 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 DHRS3O75911 302 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 PTTG1O95997 202 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 SOD3P08294 240 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 OR5AL1P0C617 328 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 CECR9P0C854 216 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 ZNF7P17097 686 aaPredicted RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 PRTN3P24158 256 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 CD82P27701 267 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 IL12BP29460 328 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 PAFAH1B2P68402 229 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 BNIP2Q12982 314 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 HES1Q14469 280 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 FAM201AQ5SY85 155 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 SYT6Q5T7P8 510 aaPredicted RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 SCXQ7RTU7 201 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 FAM122BQ7Z309 247 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 MICU2Q8IYU8 434 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 OR2M3Q8NG83 312 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 OR6K6Q8NGW6 343 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 CA5BP1Q8WTZ4 195 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 OR52B2Q96RD2 323 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 TSNAXQ99598 290 aaKnown RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 ANAPC13Q9BS18 74 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 BCL2L14Q9BZR8 327 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 COA1Q9GZY4 146 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 RPUSD1Q9UJJ7 312 aaKnown RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 AMMECR1Q9Y4X0 333 aaPredicted RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 SOX21Q9Y651 276 aaPredicted RBP0.26□□□□□ -2.37
CCDC93-209ENST00000488908 URGCP-MRPS24S4R325 110 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 SBNO1A3KN83 1393 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 RTEL1-TNFRSF6BF6WH68 1400 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 PXDNLA1KZ92 1463 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
CCDC93-209ENST00000488908 TRPM6Q9BX84 2022 aa0.25□□□□□ -2.37
CCDC93-209ENST00000488908 NCKAP5O14513 1909 aa0.25□□□□□ -2.37
CCDC93-209ENST00000488908 POLR3AO14802 1390 aaPredicted RBP0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms