RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 FAM90A12PA8MX19 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A5PA8MXJ8 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A23PA8MXZ1 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 TPPPO94811 219 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A15PP0C7V4 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A13PP0C7W8 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A14PP0C7W9 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A24PP0C7X0 464 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L2P0CJ85 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L3P0CJ86 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L4P0CJ87 422 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L5P0CJ88 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L6P0CJ89 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L7P0CJ90 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 PITPNAQ00169 270 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 SCN1BQ07699 218 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 HACD4Q5VWC8 232 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4L9Q6RFH8 374 aaPredicted RBP12.19□□□□□ -0.46
LRIF1-202ENST00000485275 THAP7Q9BT49 309 aaPredicted RBP12.19□□□□□ -0.46
LRIF1-202ENST00000485275 LIME1Q9H400 295 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 TMEM106BQ9NUM4 274 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 DUX4Q9UBX2 424 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 OR14J1Q9UGF5 321 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 ZNF222Q9UK12 451 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 VPS13CQ709C8 3753 aa12.19□□□□□ -0.46
LRIF1-202ENST00000485275 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 H7C417 338 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 SIRPB1O00241 398 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 SLC33A1O00400 549 aaPredicted RBP12.18□□□□□ -0.46
LRIF1-202ENST00000485275 ORC5O43913 435 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 PSPNO60542 156 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RP2O75695 350 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 HAND1O96004 215 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 KNG1P01042 644 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 GSTP1P09211 210 aaKnown RBP12.18□□□□□ -0.46
LRIF1-202ENST00000485275 PSG2P11465 335 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 COL8A2P25067 703 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 SMIM21Q3B7S5 101 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 ATAD3CQ5T2N8 411 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 C16orf87Q6PH81 154 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 FAM90A1Q86YD7 464 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 BPIFB2Q8N4F0 458 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 CCL17Q92583 94 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 NRGNQ92686 78 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RDH5Q92781 318 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 IFT22Q9H7X7 185 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 PLEKHJ1Q9NW61 149 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 NLKQ9UBE8 527 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 NPTNQ9Y639 398 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 UBE2QL1A1L167 161 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 ZNF44P15621 663 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 FUT3P21217 361 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 PRSS3P35030 304 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 GDNFP39905 211 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 FAM189A2Q15884 450 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 SUMF2Q8NBJ7 301 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 PALMDQ9NP74 551 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RABL2AQ9UBK7 228 aaPredicted RBP12.18□□□□□ -0.46
LRIF1-202ENST00000485275 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
LRIF1-202ENST00000485275 CENPEQ02224 2701 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 OR2AT4A6NND4 320 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 OVOL3O00110 214 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 PLA2G10O15496 165 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 SSX4O60224 188 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 LPLP06858 475 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 SELLP14151 372 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 TEX36Q5VZQ5 186 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 STUMQ69YW2 141 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 TRAPPC6BQ86SZ2 158 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 OR11L1Q8NGX0 322 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 ANGPTL6Q8NI99 470 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 NEDD4LQ96PU5 975 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 RASL12Q9NYN1 266 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 MTFP1Q9UDX5 166 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 WIPI2Q9Y4P8 454 aa12.17□□□□□ -0.46
LRIF1-202ENST00000485275 LINC00854A0A1B0GVQ3 168 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 TMEM82A0PJX8 343 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 MRPS10P82664 201 aaKnown RBP12.16□□□□□ -0.46
LRIF1-202ENST00000485275 KLF9Q13886 244 aaPredicted RBP12.16□□□□□ -0.46
LRIF1-202ENST00000485275 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 DEFB108BQ8NET1 73 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 MAFIPQ8WZ33 124 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 SNAPC3Q92966 411 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 DPCDQ9BVM2 203 aaPredicted RBP12.16□□□□□ -0.46
LRIF1-202ENST00000485275 CHST6Q9GZX3 395 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms