RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 LYZL2Q7Z4W2 148 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 HIST1H2BHQ93079 126 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 HIST1H2BNQ99877 126 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 HIST1H2BMQ99879 126 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 RBM24Q9BX46 236 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 UNKLQ9H9P5 680 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 BCO1Q9HAY6 547 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 TMED3Q9Y3Q3 217 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 VPS13AQ96RL7 3174 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 PI4KAP42356 2102 aa14.44□□□□□ -0.1
PCDHA1-201ENST00000378133 BPIFB3P59826 476 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 ENDOGQ14249 297 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 RSU1Q15404 277 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 GFI1BQ5VTD9 330 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 HDHD3Q9BSH5 251 aaPredicted RBP14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 GPR61Q9BZJ8 451 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 RCL1Q9Y2P8 373 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 NSG1A0A0A6YYJ2 146 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 IGHV5-10-1A0A0J9YXX1 117 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 LOC102725191A0A1B0GVB3 256 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 K7N7A8 449 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 PPP1R2P9O14990 202 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 GDF9O60383 454 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 OR5AC1P0C628 307 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 ALDH3B1P43353 468 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 ASCL1P50553 236 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 TOMM40LQ969M1 308 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 REEP6Q96HR9 211 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 ZDHHC8Q9ULC8 765 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 MRPS17Q9Y2R5 130 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 NR2C1P13056 603 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 H3F3AP84243 136 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 TGIF2LXQ8IUE1 241 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 MISP3Q96FF7 219 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 UCN2Q96RP3 112 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 PLEKHJ1Q9NW61 149 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 V9GYS6 101 aa14.43□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF587BE7ETH6 402 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 RRP8O43159 456 aaKnown RBP14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 SOD3P08294 240 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 OR5H8P0DN80 308 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 GLI4P10075 376 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 ERVFRD-1P60508 538 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 GAMTQ14353 236 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 TMEM187Q14656 261 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 ABCA11PQ4W5N1 156 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 FBXW12Q6X9E4 464 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 OR52M1Q8NGK5 317 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 HAS2Q92819 552 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 C19orf25Q9UFG5 118 aaPredicted RBP14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 CBY1Q9Y3M2 126 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 A0A087WWC5 75 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 TGIF2-C20orf24A0A0A6YYL0 155 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 A0A0U1RQV5 110 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 CYB5BO43169 146 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 TMEM225BP0DP42 221 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 NKX6-1P78426 367 aaPredicted RBP14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 DLK1P80370 383 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 ARL6IP1Q15041 203 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 SLC16A14Q7RTX9 510 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 REC114Q7Z4M0 266 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 TM2D1Q9BX74 207 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 DECR2Q9NUI1 292 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 PLEK2Q9NYT0 353 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 RFNGQ9Y644 331 aa14.42□□□□□ -0.1
PCDHA1-201ENST00000378133 G3V3Y1 287 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 H0YL77 283 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 TP53I11O14683 189 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 HSD17B6O14756 317 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 TRGC2P03986 189 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 EDN3P14138 238 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 RND3P61587 244 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 IL13RA2Q14627 380 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 HAGHQ16775 308 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 KHDC3LQ587J8 217 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 TSPO2Q5TGU0 170 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF429Q86V71 674 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 HIST3H2BBQ8N257 126 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 OR2G3Q8NGZ4 309 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 RTN4IP1Q8WWV3 396 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 PP6455Q8WZ26 134 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 NABP1Q96AH0 204 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF837Q96EG3 531 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 CCDC74BQ96LY2 380 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ABHD14AQ9BUJ0 271 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 LIME1Q9H400 295 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 NAA60Q9H7X0 242 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 WNT16Q9UBV4 365 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ANXA10Q9UJ72 324 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 CDRT15L2A8MXV6 281 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 M0R135 149 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF205O95201 554 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 DUSP1P28562 367 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 SNAI3Q3KNW1 292 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 RTL6Q6ICC9 239 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ZFP62Q8NB50 900 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 RNASE11Q8TAA1 199 aaKnown RBP14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF799Q96GE5 643 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms