RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RPS17P08708 135 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SNRPAP09012 282 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF688P0C7X2 276 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 CECR9P0C854 216 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 M6PRP20645 277 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ELK4P28324 431 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 EVI2BP34910 448 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SLCO1A2P46721 670 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 GTF2BQ00403 316 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 CDC20Q12834 499 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 PAFAH1B3Q15102 231 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 LPAL2Q16609 132 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SYPL2Q5VXT5 272 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 Q6ZR54 194 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 MTERF4Q7Z6M4 381 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 RIMKLAQ8IXN7 391 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 LINC00337Q8N6G1 96 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 Q8N9W7 124 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 LINC01555Q8NAE3 123 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 GATD1Q8NB37 220 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ERMNQ8TAM6 284 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ASB13Q8WXK3 278 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 RAB8BQ92930 207 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 OPTNQ96CV9 577 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF649Q9BS31 505 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 C9orf16Q9BUW7 83 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 TBL1XR1Q9BZK7 514 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 FGF23Q9GZV9 251 aaPredicted RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 MS4A6AQ9H2W1 248 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 OR52D1Q9H346 318 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 ASB7Q9H672 318 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC7A10Q9NS82 523 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 KLF13Q9Y2Y9 288 aaPredicted RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 EVC2Q86UK5 1308 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 CHD2O14647 1828 aaKnown RBP2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 DYSFO75923 2080 aa2.56□□□□□ -2
RNU6-1249P-201ENST00000363237 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A1W2PP64 1363 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A1W2PQL4 384 aaPredicted RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 METTL15A6NJ78 407 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 OR5H1A6NKK0 313 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 KCNK1O00180 336 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 BPY2O14599 106 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 LRP4O75096 1905 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 SCO1O75880 301 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 OR2A4O95047 310 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 VAMP5O95183 116 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 CA2P00918 260 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 MYL12AP19105 171 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 HSD11B1P28845 292 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 PYCR1P32322 319 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 IDH2P48735 452 aaKnown RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 CCL7P80098 99 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF235Q14590 738 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 SNRNP35Q16560 246 aaKnown RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 TMEM176BQ3YBM2 270 aaPredicted RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 FAM78AQ5JUQ0 283 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 UBE2NLQ5JXB2 153 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 GLYATQ6IB77 296 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 TNFAIP8L2Q6P589 184 aaPredicted RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC16A13Q7RTY0 426 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 GALNT10Q86SR1 603 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 STK40Q8N2I9 435 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 RIBC1Q8N443 379 aaPredicted RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 C15orf56Q8N910 161 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 OR5M1Q8NGP8 315 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 OR6K3Q8NGY3 331 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 HAVCR2Q8TDQ0 301 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 PPCDCQ96CD2 204 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 OR2A7Q96R45 310 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 NUDT9Q9BW91 350 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 PLEKHF2Q9H8W4 249 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 PLSCR3Q9NRY6 295 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 GPATCH8Q9UKJ3 1502 aaKnown RBP2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF337Q9Y3M9 751 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 LRRC42Q9Y546 428 aa2.55□□□□□ -2
RNU6-1249P-201ENST00000363237 DNMT1P26358 1616 aaKnown RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 NOS1P29475 1434 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 IGHV2-26A0A0B4J1V2 119 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 IGHV3-72A0A0B4J1Y9 119 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 IGHV7-4-1A0A0J9YVY3 117 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 C9JQL5 133 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 H3BP45 60 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 GYG2O15488 501 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 COX7A2P2O60397 106 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 PLIN3O60664 434 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 LY6G6DO95868 133 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 IFNA16P05015 189 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF17P17021 662 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 RPS12P25398 132 aaKnown RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 PSMA1P25786 263 aaKnown RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 AGTR1P30556 359 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 OMPP47874 163 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 IDH3GP51553 393 aaPredicted RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 MNAT1P51948 309 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 WNT4P56705 351 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms