RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PITPNC1Q9UKF7 332 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 TCF19Q9Y242 345 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 MYRFQ9Y2G1 1151 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 RPL36Q9Y3U8 105 aaKnown RBP14.34□□□□□ -0.11
HDDC3-201ENST00000330334 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 SESN1Q9Y6P5 492 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 IGKV1-12A0A0C4DH73 117 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 FUOMA2VDF0 154 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 CHST1O43916 411 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 ZFPL1O95159 310 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 IGKV1D-12P01611 117 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 DUSP1P28562 367 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 P2RX3P56373 397 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 SSX2Q16385 188 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 PDLIM3Q53GG5 364 aaPredicted RBP14.33□□□□□ -0.12
HDDC3-201ENST00000330334 KLHL22Q53GT1 634 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 LDLRAD2Q5SZI1 272 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 Q6ZTK2 550 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 PQLC1Q8N2U9 271 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 CHST6Q9GZX3 395 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 ISG20L2Q9H9L3 353 aaKnown RBP14.33□□□□□ -0.12
HDDC3-201ENST00000330334 EXOSC4Q9NPD3 245 aaKnown RBP14.33□□□□□ -0.12
HDDC3-201ENST00000330334 ABCB10Q9NRK6 738 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 FAM118AQ9NWS6 357 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 DSCAML1Q8TD84 2053 aa14.33□□□□□ -0.12
HDDC3-201ENST00000330334 IGHV2-26A0A0B4J1V2 119 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 A6NDX4 124 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 OR2H2O95918 312 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 CSN2P05814 226 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 CCDC159P0C7I6 412 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 LPCAT4Q643R3 524 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 OR13C9Q8NGT0 318 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 OR5AK2Q8NH90 309 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 RDH12Q96NR8 316 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 JAM3Q9BX67 310 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 TMEM133Q9H2Q1 129 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 AMBNQ9NP70 447 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 TAS2R3Q9NYW6 316 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 GSTK1Q9Y2Q3 226 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 SIGLEC9Q9Y336 463 aa14.32□□□□□ -0.12
HDDC3-201ENST00000330334 A0A0G2JK05 382 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 MEX3AA1L020 520 aaKnown RBP14.31□□□□□ -0.12
HDDC3-201ENST00000330334 EBAG9O00559 213 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 SULT1B1O43704 296 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 RAB13P51153 203 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 GBX2P52951 348 aaPredicted RBP14.31□□□□□ -0.12
HDDC3-201ENST00000330334 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
HDDC3-201ENST00000330334 KISS1Q15726 138 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 FAM189A2Q15884 450 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 OR52W1Q6IF63 320 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 CCBE1Q6UXH8 406 aaPredicted RBP14.31□□□□□ -0.12
HDDC3-201ENST00000330334 HEPN1Q6WQI6 88 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 RTN4RL2Q86UN3 420 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 TPRX1Q8N7U7 411 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 OR52I1Q8NGK6 324 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 RFT1Q96AA3 541 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 CLEC7AQ9BXN2 247 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 GAL3ST2Q9H3Q3 398 aa14.31□□□□□ -0.12
HDDC3-201ENST00000330334 TGP01266 2768 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 TRGV10A0A0A0MS01 117 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 FAM90A22PA8MWA6 464 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 E9PI62 339 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 H3BUI4 141 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 TSPAN15O95858 294 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 CSF1P09603 554 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 CALCBP10092 127 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 ZP1P60852 638 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 CCDC58Q4VC31 144 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 ELP2Q6IA86 826 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 ZNF529Q6P280 563 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 Q6P435 159 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 RNF144BQ7Z419 303 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 APH1BQ8WW43 257 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 CPNE2Q96FN4 548 aaPredicted RBP14.3□□□□□ -0.12
HDDC3-201ENST00000330334 SPACA5Q96QH8 159 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 PDCD1LG2Q9BQ51 273 aa14.3□□□□□ -0.12
HDDC3-201ENST00000330334 FGF20Q9NP95 211 aaPredicted RBP14.3□□□□□ -0.12
HDDC3-201ENST00000330334 SIRPB1O00241 398 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 TMEM225BP0DP42 221 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 HTR1DP28221 377 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 MTNR1BP49286 362 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 BDH1Q02338 343 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 IL18R1Q13478 541 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 TRAPPC6BQ86SZ2 158 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 KLHDC1Q8N7A1 406 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 PXT1Q8NFP0 134 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 OR5D18Q8NGL1 313 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 NCOR1P1Q9H4R4 102 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 ZNF702PQ9H963 129 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 SERTAD4Q9NUC0 356 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 DHDHQ9UQ10 334 aa14.29□□□□□ -0.12
HDDC3-201ENST00000330334 ODAMA1E959 279 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 DEGS1O15121 323 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 MMP23AO75900 390 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 HCKP08631 526 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 LIMS3P0CW19 117 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 LIMS4P0CW20 117 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 DCKP27707 260 aa14.28□□□□□ -0.12
HDDC3-201ENST00000330334 CD34P28906 385 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms