RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RASL10BQ96S79 203 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SLC25A31Q9H0C2 315 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 C19orf25Q9UFG5 118 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 PILRBQ9UKJ0 227 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ARID1BQ8NFD5 2236 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 A0A1B0GWJ7 208 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ZNF716A6NP11 495 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 B4E171 279 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 NPIPB11E5RHQ5 1161 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TIAF1O95411 115 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 IGKV1-39P01597 117 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 IGHEP01854 428 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 IGKV1D-39P04432 117 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 OR5H8P0DN80 308 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GNRHRP30968 328 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CDAP32320 146 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TSPAN7P41732 249 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 DNASE1L1P49184 302 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 RGS19P49795 217 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SNU13P55769 128 aaKnown RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 MLF1P58340 268 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 KISS1Q15726 138 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 DEFB133Q30KQ1 61 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SNAI3Q3KNW1 292 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GPR157Q5UAW9 335 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 C11orf88Q6PI97 169 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GGNQ86UU5 652 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ZNF383Q8NA42 475 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 OR13D1Q8NGV5 346 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 KCNE4Q8WWG9 221 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 PIGTQ969N2 578 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 HS3ST6Q96QI5 342 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TOLLIPQ9H0E2 274 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ZNF576Q9H609 170 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ZC4H2Q9NQZ6 224 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ANXA10Q9UJ72 324 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TP53TG3Q9ULZ0 132 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TRBV24-1A0A075B6N3 115 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 A0A1B0GU03 582 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 DUXBA0A1W2PPF3 345 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 CDC14CA4D256 554 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 PMS2P5A8MQ11 134 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SHISA8B8ZZ34 492 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 RER1O15258 196 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SYT7O43581 403 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 NAPSAO96009 420 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 CD55P08174 381 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SLC25A6P12236 298 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 MMP9P14780 707 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 COMPP49747 757 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 BIDP55957 195 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 RAB5BP61020 215 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 PCSK4Q6UW60 755 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 REC114Q7Z4M0 266 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 TDHQ8IZJ6 230 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 CPT1CQ8TCG5 803 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 AGMATQ9BSE5 352 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 ACTR3CQ9C0K3 210 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 NAA60Q9H7X0 242 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SPACA1Q9HBV2 294 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 TREM1Q9NP99 234 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 GPR84Q9NQS5 396 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SOHLH2Q9NX45 425 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 AK3Q9UIJ7 227 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 CACNA1CQ13936 2221 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 LOC102723971A0A1B0GUV8 181 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C9J4A7 227 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 H0YL77 283 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 H3BQ15 152 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 NME2P1O60361 137 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 SCAF4O95104 1147 aaKnown RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR6A2O95222 327 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 HCKP08631 526 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 MSR1P21757 451 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 DHPSP49366 369 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 CLDN17P56750 224 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 RAC1P63000 192 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 WDR25Q64LD2 544 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 LCN10Q6JVE6 187 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 LIAT1Q6ZQX7 453 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C6orf201Q7Z4U5 140 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 JAGN1Q8N5M9 183 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR11L1Q8NGX0 322 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 ZNF837Q96EG3 531 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 RHOVQ96L33 236 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C1QTNF5Q9BXJ0 243 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 PRDM14Q9GZV8 571 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 LYRM2Q9NU23 88 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 A0A1B0GV90 55 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 C13orf42A0A1B0GVH6 325 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 GALR2O43603 387 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 HSPB1P04792 205 aaKnown RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 MMP7P09237 267 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 ZNF883P0CG24 379 aa4.67□□□□□ -1.66
VPS50-202ENST00000305866 ZNF41P51814 821 aaPredicted RBP4.67□□□□□ -1.66
VPS50-202ENST00000305866 RAB1AP62820 205 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms