RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ETHE1O95571 254 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 HIST1H1DP16402 221 aaKnown RBP4.35□□□□□ -1.71
CSMD3-201ENST00000297405 EMP3P54852 163 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 GGTLC2Q14390 218 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 ADIPOQQ15848 244 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 PRAMEF5Q5TYX0 476 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 PRAMEF6Q5VXH4 476 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 RHBDD1Q8TEB9 315 aa4.35□□□□□ -1.71
CSMD3-201ENST00000297405 ZNF764Q96H86 408 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-201ENST00000297405 CTNSO60931 367 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FLT3LGP49771 235 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FUT6P51993 359 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 PHLDA2Q53GA4 152 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 RASL11AQ6T310 242 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 NHLRC1Q6VVB1 395 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 AMBRA1Q9C0C7 1298 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ALKBH4Q9NXW9 302 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TRAV34A0A0B4J273 112 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 A0A1B0GTH9 108 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 NDUFC2O95298 119 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 CLDN7O95471 211 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 CST3P01034 146 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 NMBP08949 121 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 LINC00869P0C866 280 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 MGAT2Q10469 447 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 OR10G4Q8NGN3 311 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 EMID1Q96A84 441 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 LINC00052Q96N35 136 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 AQP10Q96PS8 301 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SDF2Q99470 211 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TIMM9Q9Y5J7 89 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 UBE2Q2LH0YL09 131 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 HKR1P10072 659 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TIMM23BQ5SRD1 257 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SYPL2Q5VXT5 272 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 GLIPR1L1Q6UWM5 242 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 STAC2Q6ZMT1 411 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ADGRA1Q86SQ6 560 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 RTN4RL1Q86UN2 441 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 RPS19BP1Q86WX3 136 aaKnown RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 CLDN19Q8N6F1 224 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 GRAMD2BQ96HH9 432 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 KIR3DX1Q9H7L2 352 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SNRPNP63162 240 aaKnown RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 DEFB134Q4QY38 66 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SAMD7Q7Z3H4 446 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 PLPP6Q8IY26 295 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 CYB561A3Q8NBI2 242 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 MUCL1Q96DR8 90 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ULBP2Q9BZM5 246 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SERTM2A0A1B0GWG4 89 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 DGCR2P98153 550 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SOWAHAQ2M3V2 549 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ZNF775Q96BV0 537 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FAM71F1Q96KD3 344 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ZMIZ1Q9ULJ6 1067 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 OGG1O15527 345 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FAM157CP0CG43 387 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 CRYBB2P43320 205 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 OR1D5P58170 312 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SLC38A11Q08AI6 406 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FNDC7Q5VTL7 733 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TMEM207Q6UWW9 146 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 MDGA1Q8NFP4 955 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 OR2V1Q8NHB1 315 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SLC26A1Q9H2B4 701 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FBXL12Q9NXK8 326 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FUT9Q9Y231 359 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TRBV20-1A0A075B6N2 111 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 HLA-DQB1P01920 261 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 FABP5Q01469 135 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TMEM30BQ3MIR4 351 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 LIAT1Q6ZQX7 453 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 ARIH2OSQ8N7S6 290 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 OR1N1Q8NGS0 311 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 SPPL3Q8TCT6 385 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 WDR92Q96MX6 357 aa4.34□□□□□ -1.71
CSMD3-201ENST00000297405 TINAGL1Q9GZM7 467 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-201ENST00000297405 GCM2O75603 506 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-201ENST00000297405 CNIH1O95406 144 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 TIMP2P16035 220 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 LY6KQ17RY6 165 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 C15orf39Q6ZRI6 1047 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 H1FNTQ75WM6 255 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-201ENST00000297405 CSF3RQ99062 836 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM126AQ9H061 195 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 HS3ST2Q9Y278 367 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 A6NL46 340 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 M0QZ24 198 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 OR2J3O76001 311 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 ZFAND5O76080 213 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 CD3DP04234 171 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 ACER2Q5QJU3 275 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 VAX1Q5SQQ9 334 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 FAM78BQ5VT40 261 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 CALHM1Q8IU99 346 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 OR10W1Q8NGF6 305 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 OR51B6Q9H340 312 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 EMCNQ9ULC0 261 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms