RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PCOLCE2Q9UKZ9 415 aa16.47■□□□□ 0.23
SMARCC1-201ENST00000254480 A0A1W2PQF6 199 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 HSBP1O75506 76 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 IL11P20809 199 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 FA2HQ7L5A8 372 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 FGF2P09038 288 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 FBP1P09467 338 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 PCMT1P22061 227 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 DYNLT3P51808 116 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 ZNF770Q6IQ21 691 aaPredicted RBP16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 TMEM65Q6PI78 240 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 NUBPLQ8TB37 319 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 SAP30LQ9HAJ7 183 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 APC2O95996 2303 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 MOSPD3O75425 235 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 MPC2O95563 127 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 CDC34P49427 236 aaPredicted RBP16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 JMJD6Q6NYC1 403 aaPredicted RBP16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 PTP4A1Q93096 173 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 ZNF488Q96MN9 340 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 KIAA1324LA8MWY0 1029 aaPredicted RBP16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 ZNF737O75373 536 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 REG1BP48304 166 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 FBXL17Q9UF56 701 aa16.46■□□□□ 0.23
SMARCC1-201ENST00000254480 SNRPCP09234 159 aaKnown RBP16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 CAMPP49913 170 aa16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF66Q6ZN08 573 aa16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 DUSP18Q8NEJ0 188 aa16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 ZPLD1Q8TCW7 415 aa16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.22
SMARCC1-201ENST00000254480 HAND1O96004 215 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 OR4A8P0C604 315 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 MRPS11P82912 194 aaKnown RBP16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 NAT8BQ9UHF3 227 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 CST4P01036 141 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 IGFBP7Q16270 282 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 OR5D13Q8NGL4 314 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 WSB1Q9Y6I7 421 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 GALR1P47211 349 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 OR2C3Q8N628 320 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 MOB1BQ7L9L4 216 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 SSMEM1Q8WWF3 244 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 CXorf58Q96LI9 332 aa16.45■□□□□ 0.22
SMARCC1-201ENST00000254480 SIGLEC14Q08ET2 396 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 TMEM211Q6ICI0 200 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 OR10G4Q8NGN3 311 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 OR10G9Q8NGN4 311 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 OR10G7Q8NGN6 311 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 SLC25A40Q8TBP6 338 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF385AQ96PM9 386 aaKnown RBP16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 GP1BAP07359 652 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 RAB7AP51149 207 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 DEGS2Q6QHC5 323 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 TMEM18Q96B42 140 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 SEBOXQ9HB31 216 aaPredicted RBP16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 SLC17A5Q9NRA2 495 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 KIAA1217Q5T5P2 1943 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 RREB1Q92766 1687 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 GNG4P50150 75 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 RAB1CQ92928 201 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 HDHD3Q9BSH5 251 aaPredicted RBP16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 G6PCP35575 357 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 CCL28Q9NRJ3 127 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 TPPP2P59282 170 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 GAPTQ8N292 157 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 OR1K1Q8NGR3 316 aa16.44■□□□□ 0.22
SMARCC1-201ENST00000254480 TRAV8-7A0A075B6U6 113 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 PNPP00491 289 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 PGA3P0DJD8 388 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 MDH2P40926 338 aaKnown RBP16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 AMTP48728 403 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 TCL1AP56279 114 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF154Q13106 437 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 TGIF2LYQ8IUE0 185 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 TPRX1Q8N7U7 411 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 NOL4LQ96MY1 436 aaPredicted RBP16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 TUBAL3A6NHL2 446 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 TOX3O15405 576 aaPredicted RBP16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 IGHV4-34P06331 123 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 VAMP3Q15836 100 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 DMKNQ6E0U4 476 aaPredicted RBP16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 FAM24BQ8N5W8 94 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 R3HDM4Q96D70 268 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 CHRDL1Q9BU40 450 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 OR2H1Q9GZK4 316 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 GPR35Q9HC97 309 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 NEU3Q9UQ49 428 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 PRSS23O95084 383 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 PMELP40967 661 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 RAB40CQ96S21 281 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 CDRT15L2A8MXV6 281 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 HIST1H3AP68431 136 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 AESQ08117 197 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 INPP5JQ15735 1006 aaPredicted RBP16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 DCAF10Q5QP82 559 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 CD300LDQ6UXZ3 194 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 WFDC3Q8IUB2 231 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 NEURL2Q9BR09 285 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 NTMQ9P121 344 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms