RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MDH2P40926 338 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 ZNF146Q15072 292 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 SPIN3Q5JUX0 258 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 SFRP4Q6FHJ7 346 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 OR10K2Q6IF99 312 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 FIP1L1Q6UN15 594 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 LRRC28Q86X40 367 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 C19orf18Q8NEA5 215 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 ACOT12Q8WYK0 555 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 AP3S1Q92572 193 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 PTX4Q96A99 478 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 COX4I2Q96KJ9 171 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 KCNK15Q9H427 330 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 SEBOXQ9HB31 216 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 TMEM165Q9HC07 324 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 ETV7Q9Y603 341 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 ZANQ9Y493 2812 aa16.6■□□□□ 0.25
PDLIM2-221ENST00000622702 TMEM272A0A1B0GTI8 110 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 OR2AT4A6NND4 320 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 KCNJ8Q15842 424 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 ZNF404Q494X3 552 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 STUMQ69YW2 141 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 MAPK1IP1LQ8NDC0 245 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 DEFB108BQ8NET1 73 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 LGALS14Q8TCE9 139 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 FAM46BQ96A09 425 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 POM121Q96HA1 1249 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 PIMREGQ9BSJ6 248 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 DCUN1D5Q9BTE7 237 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 TMEM59Q9BXS4 323 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 BANF2Q9H503 90 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 IL36RNQ9UBH0 155 aa16.59■□□□□ 0.25
PDLIM2-221ENST00000622702 IGHV3OR15-7A0A075B7D8 119 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 VWC2LB2RUY7 222 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 MPIG6BO95866 241 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 INHBBP09529 407 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 PSG2P11465 335 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 SLC25A16P16260 332 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 RAB6AP20340 208 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 RBM11P57052 281 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 RPS27AP62979 156 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 IL13RA2Q14627 380 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 TMEM155Q4W5P6 130 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 AVPI1Q5T686 147 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 MUC20Q8N307 709 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 ANGPTL6Q8NI99 470 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 Q96M66 194 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 TM2D1Q9BX74 207 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 BPESC1Q9GZL8 116 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 SLIRPQ9GZT3 109 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 ZNF222Q9UK12 451 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 RAB22AQ9UL26 194 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 SPATA2Q9UM82 520 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 ST3GAL6Q9Y274 331 aa16.58■□□□□ 0.24
PDLIM2-221ENST00000622702 IGKV1D-17A0A075B6S4 117 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 RFPL4AA6NLU0 287 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 RFPL4AL1F8VTS6 287 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 TNFRSF13BO14836 293 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 NDUFA2O43678 99 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 PIGYQ3MUY2 71 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 ATPAF1Q5TC12 328 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 LINC00596Q86U02 117 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 OR5H6Q8NGV6 325 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 TMEM246Q9BRR3 403 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 SELENOIQ9C0D9 397 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 DNTTIP1Q9H147 329 aa16.57■□□□□ 0.24
PDLIM2-221ENST00000622702 AMY2BP19961 511 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 NR4A2P43354 598 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 PLA2G7Q13093 441 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 DCDC5Q6ZRR9 648 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 OR5T2Q8NGG2 359 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 SMR3AQ99954 134 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 URM1Q9BTM9 101 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 LPAR5Q9H1C0 372 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 GLS2Q9UI32 602 aa16.56■□□□□ 0.24
PDLIM2-221ENST00000622702 A0A075B6Q4 140 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 ISPDA4D126 451 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A10PA6NDY2 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A18PA6NE21 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A16PA6NEW6 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A20PA6NIJ5 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A8PA6NJQ4 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A7PA6NKC0 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A22PA8MWA6 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A12PA8MX19 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A5PA8MXJ8 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A23PA8MXZ1 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 HAND1O96004 215 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 GYPAP02724 150 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A15PP0C7V4 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A13PP0C7W8 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A14PP0C7W9 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM90A24PP0C7X0 464 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 PRDX2P32119 198 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 EFNB2P52799 333 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 SNU13P55769 128 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM189A2Q15884 450 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 MPV17LQ2QL34 196 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 MZT2AQ6P582 158 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 FAM89BQ8N5H3 189 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms