RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CTLA4P16410 223 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 RAB3BP20337 219 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 IL11P20809 199 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 LAP3P28838 519 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 HSD11B1P28845 292 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 CD79BP40259 229 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 INPP1P49441 399 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 PSMD7P51665 324 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 GRB2P62993 217 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 FABP5Q01469 135 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 CDC20Q12834 499 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ZNF181Q2M3W8 571 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 RGS21Q2M5E4 152 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ACSM3Q53FZ2 586 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 HSD17B12Q53GQ0 312 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TEX30Q5JUR7 227 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 LINC01590Q5TEZ4 76 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 CARD17Q5XLA6 110 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 DMKNQ6E0U4 476 aaPredicted RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 CD200R1LQ6Q8B3 271 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 DEGS2Q6QHC5 323 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 LRRN1Q6UXK5 716 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 BAIAP2L2Q6UXY1 529 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 DPY19L4Q7Z388 723 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ABHD12BQ7Z5M8 362 aaPredicted RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 CEACAM19Q7Z692 300 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 LUZP2Q86TE4 346 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 YRDCQ86U90 279 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 CATSPERDQ86XM0 798 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TIGD4Q8IY51 512 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 UBQLNLQ8IYU4 475 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ZNF679Q8IYX0 411 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR6V1Q8N148 313 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 GPR137CQ8N3F9 429 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ZADH2Q8N4Q0 377 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TEX19Q8NA77 164 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 SYT14Q8NB59 555 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR9K2Q8NGE7 335 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR5M1Q8NGP8 315 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ZPLD1Q8TCW7 415 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 GHSRQ92847 366 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 SLC25A46Q96AG3 418 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 PELI1Q96FA3 418 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TSSK2Q96PF2 358 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR8B4Q96RC9 309 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 KCNS3Q9BQ31 491 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 KLHDC3Q9BQ90 382 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 SLC30A2Q9BRI3 323 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 CCDC32Q9BV29 185 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TTTY12Q9BZ98 90 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TTTY10Q9BZA0 68 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ULBP2Q9BZM5 246 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 SLIRPQ9GZT3 109 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 NXF2Q9GZY0 626 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 WNT5BQ9H1J7 359 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TPK1Q9H3S4 243 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 C1orf198Q9H425 327 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 NIPAL2Q9H841 368 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 MOB1AQ9H8S9 216 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 SP140LQ9H930 580 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ISG20L2Q9H9L3 353 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 ASCL3Q9NQ33 180 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ACOXLQ9NUZ1 547 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 MED29Q9NX70 200 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 RABL2AQ9UBK7 228 aaPredicted RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 RABL2BQ9UNT1 228 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 ANKHD1Q8IWZ3 2542 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 TRAV1-2A0A0B4J238 106 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 TRAV17A0A0B4J275 112 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ISPDA4D126 451 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ANXA2P2A6NMY6 339 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SRRM5B3KS81 715 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ZNF878C9JN71 531 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 TFECO14948 347 aaPredicted RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 TRAF3IP2O43734 574 aaPredicted RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 EFNA2O43921 213 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 CXCL13O43927 109 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 FARS2O95363 451 aaKnown RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 F10P00742 488 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ADRA2AP08913 450 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 QDPRP09417 244 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 OCM2P0CE71 109 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 UBCP0CG48 685 aaKnown RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 PGA4P0DJD7 388 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PGA3P0DJD8 388 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ALOX5APP20292 161 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 NPR2P20594 1047 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 MSR1P21757 451 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PTBP1P26599 531 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS29-212ENST00000621131 TGFBR1P36897 503 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 CCL11P51671 97 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 CAPZA1P52907 286 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PPP5CP53041 499 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PCBD1P61457 104 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PPIAP62937 165 aaKnown RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 CAMK2DQ13557 499 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SLC17A1Q14916 467 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SLC10A1Q14973 349 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 TGIF1Q15583 401 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 BCL2A1Q16548 175 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms