RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SLC25A4P12235 298 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 RPS2P15880 293 aaKnown RBP15.55■□□□□ 0.08
SMPD3-211ENST00000568373 KIR2DL2P43627 348 aaPredicted RBP15.55■□□□□ 0.08
SMPD3-211ENST00000568373 SLC9A3R2Q15599 337 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 NHLRC3Q5JS37 347 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 C11orf87Q6NUJ2 197 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 ZNF442Q9H7R0 627 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 MTCH1Q9NZJ7 389 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 C14orf166Q9Y224 244 aaKnown RBP15.55■□□□□ 0.08
SMPD3-211ENST00000568373 SPTBN4Q9H254 2564 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 AKAP13Q12802 2813 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 RPS10-NUDT3A0A1W2PQS6 291 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 FAM221AA4D161 298 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 OR5B21A6NL26 309 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 PRSS44E7EML9 344 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 SERPINF1P36955 418 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 MRPL49Q13405 166 aaKnown RBP15.55■□□□□ 0.08
SMPD3-211ENST00000568373 GABRA6Q16445 453 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 LRRC37A5PQ49AS3 106 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 TMEM211Q6ICI0 200 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 COQ8AQ8NI60 647 aa15.55■□□□□ 0.08
SMPD3-211ENST00000568373 A0A1W2PR80 420 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 LINC00862A6NCI5 91 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 C5orf51A6NDU8 294 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 EEF1E1-BLOC1S5C9J1V9 151 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 F8VVB4 439 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 F8VWA3 439 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 TRAPPC2LH3BP13 241 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 IDH3GP51553 393 aaPredicted RBP15.54■□□□□ 0.08
SMPD3-211ENST00000568373 ACSF3Q4G176 576 aaPredicted RBP15.54■□□□□ 0.08
SMPD3-211ENST00000568373 CLLU1Q5K131 121 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 SPATA46Q5T0L3 261 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 OR2T2Q6IF00 324 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 DHRS11Q6UWP2 260 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 GSG1LQ6UXU4 331 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 OR6K3Q8NGY3 331 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 SLX1AQ9BQ83 275 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 ZNF286AQ9HBT8 521 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 RAB18Q9NP72 206 aa15.54■□□□□ 0.08
SMPD3-211ENST00000568373 SMPD2O60906 423 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 KNG1P01042 644 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 IL32P24001 234 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 GNG3P63215 75 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 ANKRD55Q3KP44 614 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 OR2A2Q6IF42 318 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 VWA1Q6PCB0 445 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 INO80CQ6PI98 192 aaPredicted RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 SLC22A25Q6T423 547 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 FBXW12Q6X9E4 464 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 LIME1Q9H400 295 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 C13orf42A0A1B0GVH6 325 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 AHRRA9YTQ3 701 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 TPD52L2O43399 206 aaKnown RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 SYNGR1O43759 233 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 CTSDP07339 412 aaPredicted RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 COX5AP20674 150 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 HAGHLQ6PII5 290 aaPredicted RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 Q6ZPA2 131 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 ZNF573Q86YE8 665 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 MARS2Q96GW9 593 aaKnown RBP15.53■□□□□ 0.08
SMPD3-211ENST00000568373 HS3ST6Q96QI5 342 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 CITED4Q96RK1 184 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 DHRS9Q9BPW9 319 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 GSX2Q9BZM3 304 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 NMES1Q9C002 83 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 CDH20Q9HBT6 801 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 RDH8Q9NYR8 311 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 TNFSF18Q9UNG2 199 aa15.53■□□□□ 0.08
SMPD3-211ENST00000568373 HOXB1P14653 301 aaPredicted RBP15.52■□□□□ 0.08
SMPD3-211ENST00000568373 CA6P23280 308 aa15.52■□□□□ 0.08
SMPD3-211ENST00000568373 RAB14P61106 215 aa15.52■□□□□ 0.08
SMPD3-211ENST00000568373 MPV17LQ2QL34 196 aa15.52■□□□□ 0.08
SMPD3-211ENST00000568373 EXTL1Q92935 676 aa15.52■□□□□ 0.08
SMPD3-211ENST00000568373 PRR13Q9NZ81 148 aa15.52■□□□□ 0.08
SMPD3-211ENST00000568373 RCC2Q9P258 522 aaKnown RBP15.52■□□□□ 0.08
SMPD3-211ENST00000568373 A0A0D9SG52 128 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 CRHP06850 196 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 PTGER4P35408 488 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 PPP1CBP62140 327 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 CYCSP99999 105 aaKnown RBP15.52■□□□□ 0.07
SMPD3-211ENST00000568373 ZNF345Q14585 488 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 BOD1Q96IK1 185 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 IL36RNQ9UBH0 155 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 LHX6Q9UPM6 363 aa15.52■□□□□ 0.07
SMPD3-211ENST00000568373 PIEZO1Q92508 2521 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 SVILO95425 2214 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 ADAP1O75689 374 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 B3GALNT1O75752 331 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 FOXF2Q12947 444 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 TSC22D1Q15714 1073 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 C1orf162Q8NEQ5 155 aaPredicted RBP15.51■□□□□ 0.07
SMPD3-211ENST00000568373 THAP6Q8TBB0 222 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 PLK3Q9H4B4 646 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 CHMP1AQ9HD42 196 aaPredicted RBP15.51■□□□□ 0.07
SMPD3-211ENST00000568373 AUP1Q9Y679 476 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 BOD1L1Q8NFC6 3051 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 ESPL1Q14674 2120 aa15.51■□□□□ 0.07
SMPD3-211ENST00000568373 SHANK1Q9Y566 2161 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms