RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PCK2Q16822 640 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 PDZD11Q5EBL8 140 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 OR14K1Q8NGZ2 314 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 RASL10BQ96S79 203 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 DEFB126Q9BYW3 111 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 WDR54Q9H977 334 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 MED29Q9NX70 200 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 B3GALT5Q9Y2C3 310 aa12.21□□□□□ -0.45
RABGGTA-220ENST00000560998 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 IGKV1D-43A0A0B4J1Z2 117 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 A0A1W2PNV4 684 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 CDRT15L2A8MXV6 281 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 MASP2O00187 686 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 CYTIPO60759 359 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 DFFBO76075 338 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 LINC00614P0C842 121 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 VSIG8P0DPA2 414 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF823P16415 610 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 DLK1P80370 383 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 MYBPHQ13203 477 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 PCOLCEQ15113 449 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 OR2M3Q8NG83 312 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 CA5BP1Q8WTZ4 195 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 NIPSNAP3BQ9BS92 247 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 SMIM3Q9BZL3 60 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 PARP12Q9H0J9 701 aaKnown RBP12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM242Q9NWH2 141 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 KIAA1456Q9P272 454 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 DKKL1Q9UK85 242 aa12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 NXT1Q9UKK6 140 aaKnown RBP12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.46
RABGGTA-220ENST00000560998 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 PATE3B3GLJ2 98 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 PPA1Q15181 289 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF343Q6P1L6 599 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 FOXRED2Q8IWF2 684 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 GPR137CQ8N3F9 429 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 FRZBQ92765 325 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 SERINC1Q9NRX5 453 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 KLHL13Q9P2N7 655 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 B3GAT1Q9P2W7 334 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 SLC5A6Q9Y289 635 aa12.2□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 M0R143 59 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 EREGO14944 169 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 LAMTOR5O43504 91 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 SRP19P09132 144 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 PCP4P48539 62 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 RND2P52198 227 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 BIDP55957 195 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 LINC00346Q8IVM7 164 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 ERGIC1Q969X5 290 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 OR14J1Q9UGF5 321 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 M0QZK8 103 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 OR5H8P0DN80 308 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 AADACL3Q5VUY0 350 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM156Q8N614 296 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 FADS6Q8N9I5 356 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 ADPRHL1Q8NDY3 354 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 TMEM104Q8NE00 496 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 OR10G4Q8NGN3 311 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 ADGRG7Q96K78 797 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 GPR87Q9BY21 358 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 EMC9Q9Y3B6 208 aa12.19□□□□□ -0.46
RABGGTA-220ENST00000560998 UMODP07911 640 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 CELA2AP08217 269 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 QDPRP09417 244 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 SERPINA2P20848 420 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 CD200P41217 278 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 FOXK1P85037 733 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 TRA2AQ13595 282 aaKnown RBP eCLIP12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 DEGS2Q6QHC5 323 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 FAM213BQ8TBF2 198 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 FGGYQ96C11 551 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 EMC6Q9BV81 110 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 G6PC2Q9NQR9 355 aa12.18□□□□□ -0.46
RABGGTA-220ENST00000560998 FOXD3Q9UJU5 478 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms