RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 ZNF319Q9P2F9 582 aa11.25□□□□□ -0.61
SFSWAP-209ENST00000540469 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
SFSWAP-209ENST00000540469 KIR2DS5A0A0G2JLQ3 304 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 A0A0G2JNG1 304 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 A0A1B0GWJ7 208 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 KIR2DS3K7RE56 304 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 EREGO14944 169 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 THEGLP0DJG4 465 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 RPP30P78346 268 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 KIR2DS5Q14953 304 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 CLEC12BQ2HXU8 276 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 WDFY1Q8IWB7 410 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 NPIPB7O75200 414 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 IGHMP01871 453 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 ZNF25P17030 456 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 FUT3P21217 361 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 TMEM187Q14656 261 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 NKAIN1Q4KMZ8 207 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 DBX2Q6ZNG2 339 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 UEVLDQ8IX04 471 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 ZNF160Q9HCG1 818 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 OR14J1Q9UGF5 321 aa11.24□□□□□ -0.61
SFSWAP-209ENST00000540469 VSTM2BA6NLU5 285 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 BCAT2O15382 392 aaPredicted RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 DFFBO76075 338 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 HBE1P02100 147 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 NOVA1P51513 510 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 TFF2Q03403 129 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 ICAM4Q14773 271 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 DDA1Q9BW61 102 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 DKKL1Q9UK85 242 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 TP53TG5Q9Y2B4 290 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 SHANK1Q9Y566 2161 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 ARL4DP49703 201 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 C16orf47Q6ZP98 133 aaPredicted RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 MRPL41Q8IXM3 137 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 DYRK2Q92630 601 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 UCK1Q9HA47 277 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 C9J4A7 227 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 TNFRSF10CO14798 259 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 HSPB1P04792 205 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 DDIT4LQ96D03 193 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 BOD1Q96IK1 185 aa11.23□□□□□ -0.61
SFSWAP-209ENST00000540469 IGHG1P01857 330 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 DBHP09172 617 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MMP7P09237 267 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MMP9P14780 707 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MTCP1P56278 107 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 SHISA6Q6ZSJ9 500 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 FBXL14Q8N1E6 418 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 GPBAR1Q8TDU6 330 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 PIGLQ9Y2B2 252 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 A0A1B0GW64 132 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MSTNO14793 375 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 COL9A1P20849 921 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 APLNRP35414 380 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 ZNF133P52736 654 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 DCAF7P61962 342 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 ADIRFQ15847 76 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MPV17LQ2QL34 196 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 C9orf40Q8IXQ3 194 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 ADIPOR1Q96A54 375 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 NEU1Q99519 415 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 IGSF23A1L1A6 192 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 GNRHRP30968 328 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 DYNLT3P51808 116 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 MFAP5Q13361 173 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 SLC10A1Q14973 349 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 ZNF664Q8N3J9 261 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 OIT3Q8WWZ8 545 aa11.22□□□□□ -0.61
SFSWAP-209ENST00000540469 PLEKHF2Q9H8W4 249 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms