RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 LIME1Q9H400 295 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 BCO1Q9HAY6 547 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 H0YIZ8 118 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 IFNA2P01563 188 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 OR5AC1P0C628 307 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATP2C1-224ENST00000533801 SLC22A20A6NK97 555 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 FIGNL2A6NMB9 653 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 CELA3BP08861 270 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 GLP1RP43220 463 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 FUT6P51993 359 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 RTN4IP1Q8WWV3 396 aaPredicted RBP13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 HRH4Q9H3N8 390 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 KLF13Q9Y2Y9 288 aaPredicted RBP13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 PCSK5Q92824 1860 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 IFNA21P01568 189 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 FCGR3AP08637 254 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 ERVS71-1P61550 626 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 GHRLQ9UBU3 117 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 C21orf140B9A014 251 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 BCL2L11O43521 198 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 RCC1P18754 421 aaPredicted RBP13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 TBPP20226 339 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF133P52736 654 aaPredicted RBP13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 VAX1Q5SQQ9 334 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 EXTL1Q92935 676 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 ARPC5LQ9BPX5 153 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 OR14J1Q9UGF5 321 aa13.75□□□□□ -0.21
ATP2C1-224ENST00000533801 TRAPPC2LH3BP13 241 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 HSD17B6O14756 317 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 NME2P22392 152 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 OMGP23515 440 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 HIST1H3AP68431 136 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 SNTB1Q13884 538 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 TMEM65Q6PI78 240 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 HIST2H3AQ71DI3 136 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 SLC38A6Q8IZM9 456 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 OR6K3Q8NGY3 331 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 NECAP2Q9NVZ3 263 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 PLCE1Q9P212 2302 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 AGFG2O95081 481 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 GRPP07492 148 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 CD37P11049 281 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 OR2A2Q6IF42 318 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 LPCAT3Q6P1A2 487 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 MYPOPQ86VE0 399 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 FAM89BQ8N5H3 189 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF286AQ9HBT8 521 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 ANKRD11Q6UB99 2663 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 DNPH1O43598 174 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 UBA52P62987 128 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 H3F3CQ6NXT2 135 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
ATP2C1-224ENST00000533801 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF708P17019 499 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 M6PRP20645 277 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 ZDHHC23Q8IYP9 409 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 KCNRGQ8N5I3 272 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 OR1S2Q8NGQ3 325 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF107Q9UII5 783 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 OR2F2O95006 317 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 IL2RAP01589 272 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 EPHA1P21709 976 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 DHODHQ02127 395 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 OR2F1Q13607 317 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 RGS7BPQ6MZT1 257 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 MDP1Q86V88 176 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 FDCSPQ8NFU4 85 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 MAGT1Q9H0U3 335 aa13.73□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 UBE2NP61088 152 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 TREM1Q9NP99 234 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 ANKRD30BLA7E2S9 258 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 B3GALNT1O75752 331 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 AADACP22760 399 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 CHATP28329 748 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 CALCRP30988 508 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 FOXL2NBQ6ZUU3 175 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 MKXQ8IYA7 352 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF565Q8N9K5 539 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 CD300LBA8K4G0 201 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 SIRPB1O00241 398 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 MSTNO14793 375 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 LRP3O75074 770 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 PDCD6O75340 191 aa13.72□□□□□ -0.21
ATP2C1-224ENST00000533801 ZNF883P0CG24 379 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms