RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TTC32Q5I0X7 151 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CLLU1OSQ5K130 101 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM215Q68D42 235 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF773Q6PK81 442 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 DPPA2Q7Z7J5 298 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 PRNTQ86SH4 94 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 LUZP2Q86TE4 346 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 LINC00596Q86U02 117 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CYP4Z2PQ8N1L4 340 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 BBS5Q8N3I7 341 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 C10orf126Q8N4M7 172 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 C8orf31Q8N9H6 132 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 OR4K2Q8NGD2 314 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TSEN15Q8WW01 171 aaKnown RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM234Q8WY98 164 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 SMIM8Q96KF7 97 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 OR2M4Q96R27 311 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 MTG1Q9BT17 334 aaPredicted RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TMED9Q9BVK6 235 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 DEFB129Q9H1M3 183 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 C6orf50Q9HD87 102 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ZC4H2Q9NQZ6 224 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 MYEF2Q9P2K5 600 aaKnown RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 KLF13Q9Y2Y9 288 aaPredicted RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ORC6Q9Y5N6 252 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 PTPRKQ15262 1439 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ATAD2BQ9ULI0 1458 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 SDK1Q7Z5N4 2213 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 AK9Q5TCS8 1911 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 TRGV2A0A075B6R0 118 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 LOC389332A0A1B0GUA5 103 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 OR2AG2A6NM03 316 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 FNDC10F2Z333 226 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 UPK2O00526 184 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 COX7A2P2O60397 106 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 HSBP1O75506 76 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GUSBP08236 651 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 SCGB1C2P0DMR2 95 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 OR12D1P0DN82 309 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 CGB7P0DN87 165 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 PSKH1P11801 424 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 G6PCP35575 357 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GPR1P46091 355 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GABRA4P48169 554 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 PRB3Q04118 309 aaPredicted RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 RAD51Q06609 339 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 TOMM34Q15785 309 aaPredicted RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GABRA6Q16445 453 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF404Q494X3 552 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 UBE2NLQ5JXB2 153 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 CLEC12AQ5QGZ9 265 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 IDNKQ5T6J7 187 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 Q6ZRU5 148 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 EIF3MQ7L2H7 374 aaKnown RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 NIT1Q86X76 327 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 FAM58AQ8N1B3 248 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 LINC00337Q8N6G1 96 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 ARL6IP6Q8N6S5 226 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 INO80EQ8NBZ0 244 aaPredicted RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 OR10P1Q8NGE3 313 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 OR4A5Q8NH83 315 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 SCGB1C1Q8TD33 95 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 TNFRSF14Q92956 283 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 DDIT4LQ96D03 193 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 MRPL32Q9BYC8 188 aaKnown RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 FAM192AQ9GZU8 254 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 OR2D2Q9H210 308 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 ASB7Q9H672 318 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GEMIN7Q9H840 131 aaKnown RBP0.29□□□□□ -2.36
CCDC93-209ENST00000488908 GCNT4Q9P109 453 aa0.29□□□□□ -2.36
CCDC93-209ENST00000488908 LCTP09848 1927 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 SLIT2O94813 1529 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 SHANK3Q9BYB0 1731 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 H3BN98 237 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 ZNF701M0R085 212 aaPredicted RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 DFFAO00273 331 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 PLEKHA8P1O95397 391 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 GCGP01275 180 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 UBCP0CG48 685 aaKnown RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 CNTFRP26992 372 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 CRABP1P29762 137 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 COILP38432 576 aaPredicted RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 IDI1Q13907 227 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 MAJINQ3KP22 176 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TPRG1LQ5T0D9 272 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 C10orf91Q5T1B1 145 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM53Q6P2H8 277 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM220Q6QAJ8 160 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 UGT2A3Q6UWM9 527 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 BZW1Q7L1Q6 419 aaKnown RBP0.28□□□□□ -2.36
CCDC93-209ENST00000488908 VN1R4Q7Z5H5 301 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 VTCN1Q7Z7D3 282 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 PQLC3Q8N755 202 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 CCNYL1Q8N7R7 359 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 GPATCH11Q8N954 259 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 OR2K2Q8NGT1 345 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 OR4X1Q8NH49 305 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 NT5CQ8TCD5 201 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 C10orf105Q8TEF2 133 aa0.28□□□□□ -2.36
CCDC93-209ENST00000488908 HIST1H2BAQ96A08 127 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms