RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RBP4P02753 201 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 BCL3P20749 454 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 RBP2P50120 134 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 SNU13P55769 128 aaKnown RBP10.69□□□□□ -0.7
CPSF4-210ENST00000469897 SLC34A1Q06495 639 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 FAM58AQ8N1B3 248 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 Q8N2B8 174 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 CCDC54Q8NEL0 328 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 OR4S1Q8NGB4 309 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 OR8J1Q8NGP2 316 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 FOXRED1Q96CU9 486 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-210ENST00000469897 ADAT3Q96EY9 351 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-210ENST00000469897 RBFOX1Q9NWB1 397 aaKnown RBP10.69□□□□□ -0.7
CPSF4-210ENST00000469897 ENOPH1Q9UHY7 261 aa10.69□□□□□ -0.7
CPSF4-210ENST00000469897 LOC107986453A0A1B0GWG9 222 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 PEX14O75381 377 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 ATF1P18846 271 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 POU3F4P49335 361 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 DYNLT3P51808 116 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 ARSJQ5FYB0 599 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-210ENST00000469897 KPRPQ5T749 579 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-210ENST00000469897 C1orf146Q5VVC0 180 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 ENTHD1Q8IYW4 607 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 DNAAF1Q8NEP3 725 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 NDNFQ8TB73 568 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 RFKQ969G6 155 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 R3HDM4Q96D70 268 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 CITED2Q99967 270 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-210ENST00000469897 OSBPL10Q9BXB5 764 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 SEBOXQ9HB31 216 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-210ENST00000469897 FAM53CQ9NYF3 392 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 FRRS1LQ9P0K9 344 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 OAZ3Q9UMX2 235 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 LINC00312Q9Y6C7 94 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 SESN1Q9Y6P5 492 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 NOTCH1P46531 2555 aa10.68□□□□□ -0.7
CPSF4-210ENST00000469897 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 SAC3D1A6NKF1 404 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 F2RL2O00254 374 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 ENTPD6O75354 484 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 CYB5AP00167 134 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 UBCP0CG48 685 aaKnown RBP10.67□□□□□ -0.7
CPSF4-210ENST00000469897 PRKACAP17612 351 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 CD24P25063 80 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 AZGP1P25311 298 aaKnown RBP10.67□□□□□ -0.7
CPSF4-210ENST00000469897 RASSF2P50749 326 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 ISL1P61371 349 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 ZNF91Q05481 1191 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 TMED1Q13445 227 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 ZNF146Q15072 292 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 MINOS1Q5TGZ0 78 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 TMEM244Q5VVB8 128 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 BAIAP2L2Q6UXY1 529 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 RNF144BQ7Z419 303 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 FAM220AQ7Z4H9 259 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 TRAPPC6BQ86SZ2 158 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 Q8IYB0 196 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 ABHD12Q8N2K0 398 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 OR2G2Q8NGZ5 317 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 RFT1Q96AA3 541 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 GABARAPL3Q9BY60 117 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 WNT10AQ9GZT5 417 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 GLS2Q9UI32 602 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 GSTK1Q9Y2Q3 226 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
CPSF4-210ENST00000469897 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 TRBV2A0A0J9YWF9 115 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 DAPL1A0PJW8 107 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 ADARB2-AS1A8MUL3 147 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 FAM90A22PA8MWA6 464 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 H3BUI4 141 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 SIRPB1O00241 398 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 DYNC1I1O14576 645 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 SH2D1BO14796 132 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 MGST3O14880 152 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 OCM2P0CE71 109 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 OCMP0CE72 109 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-210ENST00000469897 FCGR1AP12314 374 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 ZNF20P17024 532 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 PRKACBP22694 351 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 HTR1DP28221 377 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 ERP29P30040 261 aaKnown RBP10.66□□□□□ -0.7
CPSF4-210ENST00000469897 OR3A1P47881 315 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 NANOS3P60323 173 aaKnown RBP10.66□□□□□ -0.7
CPSF4-210ENST00000469897 CDC42P60953 191 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 SCN1BQ07699 218 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 AESQ08117 197 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 PDZK1IP1Q13113 114 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 TMEM95Q3KNT9 176 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 KCTD20Q7Z5Y7 419 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-210ENST00000469897 TRUB1Q8WWH5 349 aaKnown RBP10.66□□□□□ -0.7
CPSF4-210ENST00000469897 STMN2Q93045 179 aa10.66□□□□□ -0.7
CPSF4-210ENST00000469897 RNFT2Q96EX2 444 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms