RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PPP3R1P63098 170 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 Q499Y3 187 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 RNLSQ5VYX0 342 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 RBMS3Q6XE24 437 aaKnown RBP10.61□□□□□ -0.71
COL5A1-206ENST00000465877 FAM58AQ8N1B3 248 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 Q8N7P7 452 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 NANOGP1Q8N7R0 232 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 MYDGFQ969H8 173 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 CNBD2Q96M20 576 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 ERGIC3Q9Y282 383 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 SOX21Q9Y651 276 aaPredicted RBP10.61□□□□□ -0.71
COL5A1-206ENST00000465877 TENM1Q9UKZ4 2725 aa10.61□□□□□ -0.71
COL5A1-206ENST00000465877 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 MDFIC2A0A1B0GVS7 189 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 DNAJC9-AS1A6NH13 148 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 PTGES3LE9PB15 166 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 K7N7A8 449 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 M0R1W7 72 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 MAGEB3O15480 346 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 CHRM2P08172 466 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 CALCBP10092 127 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 CELP19835 753 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 FSTP19883 344 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 VHLP40337 213 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 BPIFB3P59826 476 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 RPL31P62899 125 aaKnown RBP10.6□□□□□ -0.71
COL5A1-206ENST00000465877 BDH1Q02338 343 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 KLRD1Q13241 179 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 DDI2Q5TDH0 399 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 PDZD9Q8IXQ8 264 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 OR8H2Q8N162 312 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.6□□□□□ -0.71
COL5A1-206ENST00000465877 ZDHHC22Q8N966 263 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
COL5A1-206ENST00000465877 ZFAND2BQ8WV99 257 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 ORAI1Q96D31 301 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 OR14A2Q96R54 314 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 GPER1Q99527 375 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 NKX3-1Q99801 234 aaPredicted RBP10.6□□□□□ -0.71
COL5A1-206ENST00000465877 CDCA4Q9BXL8 241 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 FAM192AQ9GZU8 254 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 HMG20AQ9NP66 347 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 RAB26Q9ULW5 256 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 LSM2Q9Y333 95 aaKnown RBP10.6□□□□□ -0.71
COL5A1-206ENST00000465877 TPRKBQ9Y3C4 175 aa10.6□□□□□ -0.71
COL5A1-206ENST00000465877 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 TRIM77I1YAP6 450 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 DUSP1P28562 367 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 DLX1P56177 255 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 UBA52P62987 128 aaKnown RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 ACSM1Q08AH1 577 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF273Q14593 569 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 IRF3Q14653 427 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 ZNF146Q15072 292 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 C17orf107Q6ZR85 190 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 OR4M1Q8NGD0 313 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 OR52N4Q8NGI2 321 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 TNFAIP8L1Q8WVP5 186 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 C1orf147Q96MC9 270 aaPredicted RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 DUSP21Q9H596 190 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 METTL8Q9H825 291 aaKnown RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 ZMAT3Q9HA38 289 aaKnown RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 RHOFQ9HBH0 211 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 EXOSC4Q9NPD3 245 aaKnown RBP10.59□□□□□ -0.71
COL5A1-206ENST00000465877 CKLFQ9UBR5 152 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 GSTK1Q9Y2Q3 226 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 PCDHGB5Q9Y5G0 923 aa10.59□□□□□ -0.71
COL5A1-206ENST00000465877 TRAV8-7A0A075B6U6 113 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TRBV5-7A0A0A0MS05 114 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 A0A1W2PPH5 198 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 SIRPB1O00241 398 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 RGS10O43665 173 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 CD1AP06126 327 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TMEM225BP0DP42 221 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 CCL3L1P16619 93 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 IGFBP3P17936 291 aaPredicted RBP10.58□□□□□ -0.72
COL5A1-206ENST00000465877 GABRR1P24046 479 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 CRHBPP24387 322 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 BDKRB2P30411 391 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 OR3A1P47881 315 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 OR3A4PP47883 348 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 EDDM3BP56851 147 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 BAMBIQ13145 260 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 BLMHQ13867 455 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 EDDM3AQ14507 147 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 MED22Q15528 200 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 GRK1Q15835 563 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 GDPD3Q7L5L3 318 aa10.58□□□□□ -0.72
COL5A1-206ENST00000465877 TCF23Q7RTU1 214 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms