RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SEC22BO75396 215 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 MMP23AO75900 390 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 IFNA10P01566 189 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 FGGP02679 453 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 LGALS1P09382 135 aaKnown RBP3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 NCK1P16333 377 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 ANOS1P23352 680 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 HMOX2P30519 316 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 ARL3P36405 182 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 RPL3P39023 403 aaKnown RBP3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 NAA10P41227 235 aaPredicted RBP3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 UGT2B15P54855 530 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 GNA13Q14344 377 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 GPAT3Q53EU6 434 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 TMPRSS11FQ6ZWK6 438 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 KRT74Q7RTS7 529 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 NAA40Q86UY6 237 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 NKAIN4Q8IVV8 208 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 Q8N9W7 124 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 TMEM185AQ8NFB2 350 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 OR2T27Q8NH04 317 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SPRYD4Q8WW59 207 aaPredicted RBP3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SLCO4A1Q96BD0 722 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SLC35G5Q96KT7 338 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 HARBI1Q96MB7 349 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 HSPB9Q9BQS6 159 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SCRT1Q9BWW7 348 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 HRH4Q9H3N8 390 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 POLE4Q9NR33 117 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 SLC2A8Q9NY64 477 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 TMCO1Q9UM00 188 aa3.74□□□□□ -1.81
SBDSP1-204ENST00000453858 GGT3PA6NGU5 568 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 FAM159BA6NKW6 160 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 A8MT66 165 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 LEUTXA8MZ59 168 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 UBE2CO00762 179 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 RNF13O43567 381 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 PAGE4O60829 102 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 IPO7O95373 1038 aaKnown RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 MT-ATP6P00846 226 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 PRSS2P07478 247 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 CTLA4P16410 223 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 MSR1P21757 451 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SPRP35270 261 aaPredicted RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 GMFBP60983 142 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 HIST1H3AP68431 136 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 HAMPP81172 84 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SCRN3Q0VDG4 424 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 EBI3Q14213 229 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 TBCEQ15813 527 aaPredicted RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 ODF3L2Q3SX64 289 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 RNF212Q495C1 297 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 FAM76BQ5HYJ3 339 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 TPTE2P1Q5T6R2 138 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 GRTP1Q5TC63 336 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 HIST2H3PS2Q5TEC6 136 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SASS6Q6UVJ0 657 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 ZYG11AQ6WRX3 759 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 HIST2H3AQ71DI3 136 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SHFQ7M4L6 423 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 DPY19L4Q7Z388 723 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 CCDC91Q7Z6B0 441 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 LINC00596Q86U02 117 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 TGIF2LXQ8IUE1 241 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 RIMKLAQ8IXN7 391 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SYCE1Q8N0S2 351 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 PDIK1LQ8N165 341 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 ZNF561Q8N587 486 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 Q8N6K4 173 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 CD177Q8N6Q3 437 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 MINDY2Q8NBR6 621 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 OR9G4Q8NGQ1 327 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 OR2K2Q8NGT1 345 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 OR10Z1Q8NGY1 313 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 OR2T11Q8NH01 316 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 OR52P1PQ8NH57 321 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SLC35B4Q969S0 331 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 FLYWCH2Q96CP2 140 aaKnown RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 SRSF8Q9BRL6 282 aaKnown RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 TMEM43Q9BTV4 400 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 CLEC7AQ9BXN2 247 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 NUF2Q9BZD4 464 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 TMEM133Q9H2Q1 129 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 ARGLU1Q9NWB6 273 aaPredicted RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 C1orf109Q9NX04 203 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 ATPIF1Q9UII2 106 aa3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 MRPS28Q9Y2Q9 187 aaKnown RBP3.73□□□□□ -1.81
SBDSP1-204ENST00000453858 RNF103-CHMP3A0A140T963 221 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 MEX3AA1L020 520 aaKnown RBP3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 ARRDC5A6NEK1 342 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 E7ESA3 106 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 G3V318 75 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 BUB1B-PAK6H3BSN5 160 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 DNALI1O14645 258 aaPredicted RBP3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 AKR7A2O43488 359 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 SOX15O60248 233 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 TPST2O60704 377 aa3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 MTRF1O75570 445 aaKnown RBP3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 SEC31AO94979 1220 aaKnown RBP3.72□□□□□ -1.81
SBDSP1-204ENST00000453858 OR6A2O95222 327 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms