RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TMEM230Q96A57 120 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 PHB2Q99623 299 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 FXYD6Q9H0Q3 95 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 C5orf66Q9H5L9 145 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 PLEKHJ1Q9NW61 149 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 CLCF1Q9UBD9 225 aa9.21□□□□□ -0.94
PKP4-206ENST00000452162 IGKV1D-8A0A087WSZ0 117 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 A0A0G2JNJ9 132 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 C5orf49A4QMS7 147 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 LINC00862A6NCI5 91 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 CCSO14618 274 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 DUS4LO95620 317 aaKnown RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 CD79AP11912 226 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 CCL2P13500 99 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 AKR1C4P17516 323 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 CHATP28329 748 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 NPY4RP50391 375 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 GMFBP60983 142 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 TAF9Q16594 264 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 NKAPLQ5M9Q1 402 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 TMUB2Q71RG4 321 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 C9orf106Q8NAJ2 232 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 RND1Q92730 232 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 POM121L2Q96KW2 1035 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 GP6Q9HCN6 339 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 Q9UFV3 132 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 SLC22A20A6NK97 555 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 ZNF850A8MQ14 1090 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 SDCBPO00560 298 aaPredicted RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 IL18BPO95998 194 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 RPA2P15927 270 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 S100A11P31949 105 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 OR3A3P47888 321 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 OR3A2P47893 321 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 RAB1AP62820 205 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 HLXQ14774 488 aaPredicted RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 LIN54Q6MZP7 749 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 OVCH2Q7RTZ1 564 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 TMEM17Q86X19 198 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 OR8H3Q8N146 312 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 OR56B2PQ8NGI1 322 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 APOBEC3DQ96AK3 386 aaPredicted RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 MRPS24Q96EL2 167 aaKnown RBP9.2□□□□□ -0.94
PKP4-206ENST00000452162 PPA2Q9H2U2 334 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 EHFQ9NZC4 300 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 CRIM1Q9NZV1 1036 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 UBQLN2Q9UHD9 624 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 AK3Q9UIJ7 227 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
PKP4-206ENST00000452162 FLNBO75369 2602 aaKnown RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 MBD3L4A6NDZ8 208 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 MBD3L3A6NE82 208 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 MBD3L5A6NJ08 208 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 NOS1APO75052 506 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 SFTPBP07988 381 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CCNOP22674 350 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 VAMP1P23763 118 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 MPGP29372 298 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CEACAM8P31997 349 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 CTAG1AP78358 180 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 PIGYQ3MUY2 71 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CHRFAM7AQ494W8 412 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 TMEM128Q5BJH2 165 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 OSR2Q8N2R0 312 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 OR1K1Q8NGR3 316 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 MBD3L2Q8NHZ7 208 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 FAAP24Q9BTP7 215 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 FGF23Q9GZV9 251 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 ZNF701Q9NV72 531 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 AUP1Q9Y679 476 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 HCFC1P51610 2035 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 PKDREJQ9NTG1 2253 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 PQLC2LA1A4F0 135 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 A1L4Q6 167 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 OR5H14A6NHG9 310 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 GEMIN2O14893 280 aaKnown RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 TIMP3P35625 211 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 DAZAP2Q15038 168 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 FBXW9Q5XUX1 488 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 TMEM65Q6PI78 240 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 DPPA2Q7Z7J5 298 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CALHM1Q8IU99 346 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 FBXL14Q8N1E6 418 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 ZNF808Q8N4W9 903 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 CASTOR1Q8WTX7 329 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 BCL2L2Q92843 193 aaPredicted RBP9.19□□□□□ -0.94
PKP4-206ENST00000452162 WNT2BQ93097 391 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 SCGB3A2Q96PL1 93 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 MAB21L2Q9Y586 359 aa9.19□□□□□ -0.94
PKP4-206ENST00000452162 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
PKP4-206ENST00000452162 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms