RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 OR13G1Q8NGZ3 307 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR56B4Q8NH76 319 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLC25A40Q8TBP6 338 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 KLF14Q8TD94 323 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 NPRL2Q8WTW4 380 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PRRT1Q99946 306 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR2J1Q9GZK6 312 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 CHST6Q9GZX3 395 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 LPAR5Q9H1C0 372 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR51B6Q9H340 312 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR51I2Q9H344 312 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 MS4A5Q9H3V2 200 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 KCNK15Q9H427 330 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 POFUT1Q9H488 388 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 BANF2Q9H503 90 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPACA1Q9HBV2 294 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 HRASLSQ9HDD0 168 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 IFT46Q9NQC8 304 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLEKHJ1Q9NW61 149 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 COQ3Q9NZJ6 369 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 NPAP1Q9NZP6 1156 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 MYEF2Q9P2K5 600 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PURGQ9UJV8 347 aaKnown RBP3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 TINAGQ9UJW2 476 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 OSGIN2Q9Y236 505 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLEKHA6Q9Y2H5 1048 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 POLDIP2Q9Y2S7 368 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 LRBAP50851 2863 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 ICE1Q9Y2F5 2266 aa3.39□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPTBN1Q01082 2364 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 HIVEP3Q5T1R4 2406 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGKV1-27A0A075B6S5 117 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 A0A0A6YYD4 124 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 A0A1B0GWJ7 208 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MED19A0JLT2 244 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MEIOCA2RUB1 952 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM235A6NFC5 223 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FOXI3A8MTJ6 420 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 DISC1C4P0D8 188 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NPIPB6E9PJ23 425 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 INMT-MINDY4F8WBC2 141 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 H7C1Q1 480 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 J3QT63 122 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MFNGO00587 321 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SOCS1O15524 211 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPRY1O43609 319 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ANGPTL7O43827 346 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TIMM8AO60220 97 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PRAF2O60831 178 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NOS1APO75052 506 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RAB3DO95716 219 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLATP00750 562 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MT-ND4P03905 459 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLA2G1BP04054 148 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 CD74P04233 296 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TCRBP04435 133 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 IFNA6P05013 189 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRAPPC2P0DI81 140 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRAPPC2BP0DI82 140 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 GNB3P16520 340 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MPZP25189 248 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 CD40P25942 277 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 GIFP27352 417 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 HLA-DMAP28067 261 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 HAAOP46952 286 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SRP9P49458 86 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FABP6P51161 128 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM50BP56557 158 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RBM11P57052 281 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 KLF3P57682 345 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RAB25P57735 213 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TAS2R46P59540 309 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FGF12P61328 243 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NKX6-1P78426 367 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FAM27E3Q08E93 113 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PSG7Q13046 419 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MPV17LQ2QL34 196 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MOGAT2Q3SYC2 334 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RNASE12Q5GAN4 147 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FAM76BQ5HYJ3 339 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 AGAP6Q5VW22 663 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 STEAP1BQ6NZ63 245 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF782Q6ZMW2 699 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RNF144BQ7Z419 303 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 C1QL2Q7Z5L3 287 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRAPPC6BQ86SZ2 158 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MYPOPQ86VE0 399 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FJX1Q86VR8 437 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM17Q86X19 198 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 CALHM1Q8IU99 346 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 CADM3Q8N126 398 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FAM58AQ8N1B3 248 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 FBXL14Q8N1E6 418 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RELL2Q8NC24 303 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 BHLHE23Q8NDY6 225 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NUP37Q8NFH4 326 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR10K1Q8NGX5 313 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 LILRB4Q8NHJ6 448 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms