RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CALHM2Q9HA72 323 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 CGGBP1Q9UFW8 167 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 MASP2O00187 686 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 P2RY10O00398 339 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SOCS7O14512 581 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 EIF4E2O60573 245 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 IGHA1P01876 353 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 IGHA2P01877 340 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 VASPP50552 380 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 DYNLT3P51808 116 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 FNDC7Q5VTL7 733 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 Q6ZPB1 254 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 PARS2Q7L3T8 475 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZNF687Q8N1G0 1237 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 IGSF8Q969P0 613 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 OR8B2Q96RD0 313 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 RSPO3Q9BXY4 272 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 CNTD2Q9H8S5 307 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 AJAP1Q9UKB5 411 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 TMED7Q9Y3B3 224 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 PIAS3Q9Y6X2 628 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZFYVE26Q68DK2 2539 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 GNG7O60262 68 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 HPXP02790 462 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ACVRL1P37023 503 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 CXCL17Q6UXB2 119 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 OR2I1PQ8NGU4 316 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 SUSD3Q96L08 255 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 ZFYVE21Q9BQ24 234 aa5.55□□□□□ -1.52
VCAN-203ENST00000343200 APOBEC3GQ9HC16 384 aaKnown RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 CICQ96RK0 1608 aaPredicted RBP5.55□□□□□ -1.52
VCAN-203ENST00000343200 SRSF10O75494 262 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 COL8A1P27658 744 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OPRK1P41145 380 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CTSCP53634 463 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MRPL58Q14197 206 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 DUSP28Q4G0W2 176 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZNF766Q5HY98 468 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 RBPMS2Q6ZRY4 209 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC36A1Q7Z2H8 476 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 WDFY1Q8IWB7 410 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 NUBPLQ8TB37 319 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 RTL8AQ9BWD3 113 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PIEZO1Q92508 2521 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TRAV8-2A0A0B4J237 113 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZAR1LA6NP61 321 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC17A2O00624 439 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ADAM20O43506 726 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 EIF1BO60739 113 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 ESDP10768 282 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC19A1P41440 591 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SPINT3P49223 89 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MEF2BQ02080 365 aaPredicted RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 PSMG4Q5JS54 123 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 Q7L0L9 218 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TCF23Q7RTU1 214 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZC3H3Q8IXZ2 948 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 POC1AQ8NBT0 407 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 KLK6Q92876 244 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CYSLTR1Q9Y271 337 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ANKRD20A5PA0PJZ0 165 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 NPIPB8E9PQR5 432 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 NPIPB9F8W1W9 429 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TMEM189-UBE2V1I3L0A0 370 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 RER1O15258 196 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 NPIPB7O75200 414 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CXCL14O95715 111 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC10A6Q3KNW5 377 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PRSS54Q6PEW0 395 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 RABEPKQ7Z6M1 372 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 RLN3Q8WXF3 142 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 EGLN2Q96KS0 407 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 F11RQ9Y624 299 aaKnown RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 A1L4Q6 167 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 GALR3O60755 368 aaPredicted RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 DHRS3O75911 302 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TRGC2P03986 189 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZBTB25P24278 435 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 FGF9P31371 208 aaPredicted RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 PMP22Q01453 160 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MORN1Q5T089 497 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 XAF1Q6GPH4 301 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 UMODL1-AS1Q8N2C9 162 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OR10G4Q8NGN3 311 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OR10G9Q8NGN4 311 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OR10G7Q8NGN6 311 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OR2K2Q8NGT1 345 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 Q8WTZ3 238 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 C16orf70Q9BSU1 422 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 EGLN1Q9GZT9 426 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC26A1Q9H2B4 701 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 DCCP43146 1447 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 LOC105371267A0A1B0GV96 52 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 M0R296 226 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZNF735P0CB33 412 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 NTSR1P30989 418 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms