RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SCGB1D1O95968 90 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 Q5PR19 223 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 NCMAPQ5T1S8 102 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 MAVSQ7Z434 540 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 OR4Q3Q8NH05 313 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 TNFRSF14Q92956 283 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 SRSF8Q9BRL6 282 aaKnown RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 OPN3Q9H1Y3 402 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 OR2T8A6NH00 312 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 A8MWL6 223 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 CA7P43166 264 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 CST9LP1Q5W188 147 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 TDHQ8IZJ6 230 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 SLC37A2Q8TED4 501 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 MOGAT1Q96PD6 335 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ZIC5Q96T25 663 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ZNF768Q9H5H4 540 aaKnown RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 VSIG4Q9Y279 399 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 COL4A6Q14031 1691 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 SIRPB1O00241 398 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 P2RX3P56373 397 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ERVFC1-1P60608 527 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 FAM181AQ8N9Y4 354 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 GPR84Q9NQS5 396 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 LSM2Q9Y333 95 aaKnown RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 MYADML2A6NDP7 307 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 H3BMH7 237 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 K7EMI3 77 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 OR5G3P0C626 314 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 CD226Q15762 336 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 FAM182BQ5T319 152 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 HEYLQ9NQ87 328 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 MKRN2OSH3BPM6 223 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 HTRA3P83110 453 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 BATFQ16520 125 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ZNF658BQ4V348 819 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 ZNF787Q6DD87 383 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 TMEM182Q6ZP80 229 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 VSTM2LQ96N03 204 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 SORBS1Q9BX66 1292 aaKnown RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 DUSP15Q9H1R2 295 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 RNF39Q9H2S5 420 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 RHBDD3Q9Y3P4 386 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 CIDEAO60543 219 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ABOP16442 354 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ATF1P18846 271 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 ACP1P24666 158 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 PPP1CCP36873 323 aaKnown RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 ASIPP42127 132 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 TCF24Q7RTU0 167 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 RTN4RL1Q86UN2 441 aaPredicted RBP3.58□□□□□ -1.84
USH2A-201ENST00000307340 GPR32P1Q8NGA4 272 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 LINC01599Q8WXQ3 324 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 GALNT14Q96FL9 552 aa3.58□□□□□ -1.84
USH2A-201ENST00000307340 HCFC1P51610 2035 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZFPL1O95159 310 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 SPNP16150 400 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NPBWR1P48145 328 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NPBWR2P48146 333 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TEPPQ6URK8 271 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR2C3Q8N628 320 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR1F12Q8NHA8 337 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TMEM255BQ8WV15 326 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 AQP3Q92482 292 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MARS2Q96GW9 593 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 GPR137Q96N19 417 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 EML5Q05BV3 1969 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TCF20Q9UGU0 1960 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 A0A1W2PR48 441 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 RAB37Q96AX2 223 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TPPP3Q9BW30 176 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 AUNIPQ9H7T9 357 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MS4A18H0YCH9 400 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 GDF1P27539 372 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CLEC12BQ2HXU8 276 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MS4A18Q3C1V0 323 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OLIG3Q7RTU3 272 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NEUROG1Q92886 237 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 SLC25A37Q9NYZ2 338 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 C5AR2Q9P296 337 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CTSFQ9UBX1 484 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 PURGQ9UJV8 347 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF724A8MTY0 619 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 FGF17O60258 216 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 PPBPP02775 128 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 G6PCP35575 357 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 RPS11P62280 158 aaKnown RBP eCLIP3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZXDCQ2QGD7 858 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 GLIPR1L1Q6UWM5 242 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF683Q8IZ20 524 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CA13Q8N1Q1 262 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MRPL30Q8TCC3 161 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 PTP4A1Q93096 173 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TNFRSF13CQ96RJ3 184 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 DYNLRB1Q9NP97 96 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 SLCO1B1Q9Y6L6 691 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CDRT15L2A8MXV6 281 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 WISP3O95389 354 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms