RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CYTL1Q9NRR1 136 aa16.08■□□□□ 0.16
RNF139-201ENST00000303545 HOXD4P09016 255 aaPredicted RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 AIMP2Q13155 320 aaKnown RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 RTL6Q6ICC9 239 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 PRSS54Q6PEW0 395 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 ASCL4Q6XD76 172 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 OR5L1Q8NGL2 311 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 LDAHQ9H6V9 325 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 ZC4H2Q9NQZ6 224 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 HSF4Q9ULV5 492 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 KMT2EQ8IZD2 1858 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 TSPAN4O14817 238 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 LILRA1O75019 489 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 ZNF728P0DKX0 622 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 RBM11P57052 281 aaKnown RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 SPEM2Q0P670 501 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 MALLQ13021 153 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 SRSF6Q13247 344 aaKnown RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 PPA1Q15181 289 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 OR2A2Q6IF42 318 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 ATRAIDQ6UW56 229 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 MRPL21Q7Z2W9 205 aaKnown RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 HSD17B13Q7Z5P4 300 aaPredicted RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 MCEMP1Q8IX19 187 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 OR5T2Q8NGG2 359 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 PRDM14Q9GZV8 571 aa16.07■□□□□ 0.16
RNF139-201ENST00000303545 LSM5Q9Y4Y9 91 aaKnown RBP16.07■□□□□ 0.16
RNF139-201ENST00000303545 CACNA1HO95180 2353 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 CA11O75493 328 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 PMP22Q01453 160 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 ABCA11PQ4W5N1 156 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 IGSF11Q5DX21 431 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 RNFT1Q5M7Z0 435 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 ZNF488Q96MN9 340 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 C1orf123Q9NWV4 160 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 PCDHB10Q9UN67 800 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 A0A1W2PR80 420 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 RRP8O43159 456 aaKnown RBP16.06■□□□□ 0.16
RNF139-201ENST00000303545 CTSDP07339 412 aaPredicted RBP16.06■□□□□ 0.16
RNF139-201ENST00000303545 OR5AC1P0C628 307 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 GGNBP1Q5YKI7 109 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 BPIFCQ8NFQ6 507 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 HPSE2Q8WWQ2 592 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 GPHA2Q96T91 129 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 ARHGAP21Q5T5U3 1957 aa16.06■□□□□ 0.16
RNF139-201ENST00000303545 TRBV6-7A0A0A0MS04 114 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 CRYM-AS1A6NIL9 109 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 PDCD6O75340 191 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 SPSB4Q96A44 273 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 ZNF552Q9H707 407 aaPredicted RBP16.05■□□□□ 0.16
RNF139-201ENST00000303545 ZNF391Q9UJN7 358 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 ESPL1Q14674 2120 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 ZNF732B4DXR9 585 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 KRBOX1C9JBD0 128 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 LINC01387J3KSC0 135 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 RCC1P18754 421 aaPredicted RBP16.05■□□□□ 0.16
RNF139-201ENST00000303545 SURF2Q15527 256 aaPredicted RBP16.05■□□□□ 0.16
RNF139-201ENST00000303545 COLCA1Q6ZS62 124 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 REPIN1Q9BWE0 567 aaKnown RBP16.05■□□□□ 0.16
RNF139-201ENST00000303545 LINC00470Q9BZP3 86 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 EDARQ9UNE0 448 aa16.05■□□□□ 0.16
RNF139-201ENST00000303545 TPT1P13693 172 aaKnown RBP16.04■□□□□ 0.16
RNF139-201ENST00000303545 BAP18Q8IXM2 172 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 RTN4IP1Q8WWV3 396 aaPredicted RBP16.04■□□□□ 0.16
RNF139-201ENST00000303545 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 IGHV3-64DA0A0J9YX35 117 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 DTYMKP23919 212 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 IL32P24001 234 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 DEFA5Q01523 94 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 TAGLNQ01995 201 aaKnown RBP16.04■□□□□ 0.16
RNF139-201ENST00000303545 LYZL2Q7Z4W2 148 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 WNT2BQ93097 391 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 SHARPINQ9H0F6 387 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 ZNF286AQ9HBT8 521 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 TMEM9BQ9NQ34 198 aa16.04■□□□□ 0.16
RNF139-201ENST00000303545 SYNGR1O43759 233 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 NME2P1O60361 137 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 FUT3P21217 361 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 NME2P22392 152 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 AADACP22760 399 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 SLC10A1Q14973 349 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 WISP2O76076 250 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 DIRAS3O95661 229 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 ARG2P78540 354 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 IL15RAQ13261 267 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 RPL7L1Q6DKI1 246 aaKnown RBP16.03■□□□□ 0.16
RNF139-201ENST00000303545 DHRS11Q6UWP2 260 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 MDS2Q8NDY4 140 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 EXTL1Q92935 676 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 PHYHIPLQ96FC7 376 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 C12orf4Q9NQ89 552 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 MTCH1Q9NZJ7 389 aa16.03■□□□□ 0.16
RNF139-201ENST00000303545 PQLC2LA1A4F0 135 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 BET1O15155 118 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 TSC22D1Q15714 1073 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 NEK7Q8TDX7 302 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 SLC2A9Q9NRM0 540 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms