RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZFAND1Q8TCF1 268 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 ASB13Q8WXK3 278 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 RTBDNQ9BSG5 229 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 DEFB127Q9H1M4 99 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 MOB1AQ9H8S9 216 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 PRR13Q9NZ81 148 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 KIF25Q9UIL4 384 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 MUC4Q99102 2169 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 NAT1P18440 290 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 S100PP25815 95 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 RIPPLY2Q5TAB7 128 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC22A16Q86VW1 577 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 ERI1Q8IV48 349 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 OR52N5Q8NH56 324 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SETD6Q8TBK2 473 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 FCAMRQ8WWV6 532 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 PGAM5Q96HS1 289 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 DIRAS2Q96HU8 199 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 EGLN1Q9GZT9 426 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 MCUBQ9NWR8 336 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 TBX1O43435 398 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC6A9P48067 706 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 AKR1D1P51857 326 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 ARG2P78540 354 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 C1QTNF12Q5T7M4 302 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC22A10Q63ZE4 541 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 OR2A2Q6IF42 318 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 CMTM1Q8IZ96 169 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 BATF2Q8N1L9 274 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 WFIKKN1Q96NZ8 548 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 METTL17Q9H7H0 456 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 FLVCR2Q9UPI3 526 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 ALG5Q9Y673 324 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 FAM157AC9JC47 383 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SMPD2O60906 423 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 MT-ATP6P00846 226 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 COL8A1P27658 744 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 APOBEC1P41238 236 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 PPT1P50897 306 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SIRPAP78324 504 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 ROR2Q01974 943 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 RAB12Q6IQ22 244 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 RHOUQ7L0Q8 258 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 EGFL6Q8IUX8 553 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 GCSAMQ8N6F7 178 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 TRMT10AQ8TBZ6 339 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 TNFRSF14Q92956 283 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 CMSS1Q9BQ75 279 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 LINC00470Q9BZP3 86 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 MMP27Q9H306 513 aa4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 KLF13Q9Y2Y9 288 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-201ENST00000260810 A0A096LPE4 126 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 A0A1W2PPZ6 126 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 GGT3PA6NGU5 568 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF878C9JN71 531 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 AQP7O14520 342 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CELP19835 753 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 AHCYP23526 432 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ART1P52961 327 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF181Q2M3W8 571 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF782Q6ZMW2 699 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 NRARPQ7Z6K4 114 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 SYS1Q8N2H4 156 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 TOMM5Q8N4H5 51 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF611Q8N823 705 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 WIPF2Q8TF74 440 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 DCTN5Q9BTE1 182 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CGGBP1Q9UFW8 167 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CMAHPQ9Y471 501 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 NPTNQ9Y639 398 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 LOC100506127A0A0U1RQW1 187 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 AHRRA9YTQ3 701 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CALCBP10092 127 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 PTBP1P26599 531 aaKnown RBP eCLIP4.68□□□□□ -1.661e-6■■■■■ 28.4
TOPBP1-201ENST00000260810 CEBPDP49716 269 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF81P51508 661 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ATP1B3P54709 279 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 PRB3Q04118 309 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC16A9Q7RTY1 509 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 RANBP3Q9H6Z4 567 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF275Q9NSD4 429 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 TBCCD1Q9NVR7 557 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 FOXJ3Q9UPW0 622 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF175Q9Y473 711 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 KLF2Q9Y5W3 355 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 PRSS46E5RG02 174 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF780AO75290 641 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 NDUFB2O95178 105 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 MPC2O95563 127 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CFDP00746 253 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CSF1P09603 554 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 MTNR1BP49286 362 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 SSR4P51571 173 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 CATR1Q13166 79 aa4.68□□□□□ -1.66
TOPBP1-201ENST00000260810 RNPS1Q15287 305 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms