RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 SigirrQ9JLZ8 409 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Padi1Q9Z185 662 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Igkv12-38A0A0G2JEI7 115 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr224M9MMJ7 314 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Lsm2O35900 95 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 FaslgP41047 279 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Crebl2Q32M00 123 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Bbs12Q5SUD9 708 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fbxo46Q8BG80 603 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Naa40Q8VE10 237 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1443Q8VFW8 312 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mrgpra6Q91ZC6 301 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm28051J3QMA2 81 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Serf1O88892 62 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mfap2P55002 183 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PmchP56942 165 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Adam12Q61824 903 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr967Q7TRA6 310 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cpne4Q8BLR2 557 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Nkx6-1Q99MA9 365 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 MtfmtQ9D799 386 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr944Q9EQ91 311 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Jag2Q9QYE5 1247 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 BC024063A0A1W2P7G7 749 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm5286E0CXI6 357 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PhyhO35386 338 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Klk1b26P36369 261 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PkiaP63248 76 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Klk8Q61955 260 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 TpppQ7TQD2 218 aaKnown RBP13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Upk3bQ80YF6 275 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ankrd12G5E893 2041 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Skint9A7TZG3 319 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Dynlrb1P62627 96 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Osgin2Q3TEE9 550 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prrc1Q3UPH1 443 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1113Q7TR54 326 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PhyhiplQ8BGT8 375 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ubac2Q8R1K1 345 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tubg2Q8VCK3 451 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 BlvrbQ923D2 206 aaKnown RBP13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Msmo1Q9CRA4 293 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mfsd4b2Q9D8I5 366 aa13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Klf5Q9Z0Z7 446 aaKnown RBP13.97□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm34653A0A1L1SR01 368 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm11009F7CWA7 138 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Crisp2P16563 243 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mas1P30554 324 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 NfybP63139 207 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rnf133Q14B02 382 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Bahd1Q497V6 772 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gpatch2Q7TQC7 527 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr859Q7TRF5 309 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Plekhm1Q7TSI1 1074 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Enkd1Q7TSV9 346 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fam98bQ80VD1 429 aaKnown RBP13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tsen54Q8C2A2 525 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mr1Q8HWB0 341 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Slc25a1Q8JZU2 311 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r72Q8K3N7 306 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1489Q8VFQ5 313 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr678Q8VG26 313 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Sntb1Q99L88 537 aaKnown RBP13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 SdhcQ9CZB0 169 aaKnown RBP13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PacrgQ9DAK2 241 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Znf593Q9DB42 134 aaKnown RBP13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Kcnip2Q9JJ69 270 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Syt9Q9R0N9 491 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm29776A0A286YEC0 699 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem182B2RVY9 229 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm17669F6QL70 154 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Esp8F7AMQ8 149 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tbx6P70327 436 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Dhrs9Q58NB6 319 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 NppcQ61839 126 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prss54Q7M756 383 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr884Q7TRE1 309 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CenpoQ8K015 298 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr126Q8VGF0 319 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Dusp22Q99N11 184 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr661Q99NH4 319 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Nudcd2Q9CQ48 157 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ceacam16E9QA28 426 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Kcng3P59053 433 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tnfrsf8Q60846 498 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Pla2g7Q60963 440 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 SordQ64442 357 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 JkampQ8BI36 311 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Abhd6Q8R2Y0 336 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr410Q8VFX7 315 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr402Q8VFX8 315 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Supt7lQ9CZV5 412 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem239Q9DA47 151 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prss1Q9Z1R9 246 aa13.96□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Igkv15-103A0A140T8P3 115 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Prkar2aP12367 401 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lrrc30Q3UV48 300 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zfp663Q6NXM6 656 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Dact2Q7TN08 757 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cpeb4Q7TN98 729 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 134.1 ms