RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NHLRC3Q5JS37 347 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 CLEC18BQ6UXF7 455 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 SLC25A26Q70HW3 274 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 PPP1R1CQ8WVI7 109 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 NANOS1Q8WY41 292 aaKnown RBP16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 SHPKQ9UHJ6 478 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 TUBAL3A6NHL2 446 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 FAM25EA8MYX2 175 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 PDCD6O75340 191 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 FCGR3AP08637 254 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 APLNRP35414 380 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 RAB14P61106 215 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 SUPT4H1P63272 117 aaKnown RBP16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 ZDHHC23Q8IYP9 409 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 HPSE2Q8WWQ2 592 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 FGF23Q9GZV9 251 aaPredicted RBP16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 NARFLQ9H6Q4 476 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 GLRX2Q9NS18 164 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 CRIM1Q9NZV1 1036 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 SPEF1Q9Y4P9 236 aa16.98■□□□□ 0.31
PCDHB11-202ENST00000624887 FAM186AA6NE01 2351 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 MED12LQ86YW9 2145 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF292O60281 2723 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 GLRA1P23415 457 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 GSG1LQ6UXU4 331 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 P4HA3Q7Z4N8 544 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 SLC51BQ86UW2 128 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 OR6K3Q8NGY3 331 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 CLCF1Q9UBD9 225 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 B3GALNT1O75752 331 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF660Q6AZW8 331 aaPredicted RBP16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 SAXO1Q8IYX7 474 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 LRRC20Q8TCA0 184 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 DECR2Q9NUI1 292 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 TNFSF18Q9UNG2 199 aa16.97■□□□□ 0.31
PCDHB11-202ENST00000624887 DOCK7Q96N67 2140 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 ZFHX2Q9C0A1 2572 aaPredicted RBP16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 TRAV17A0A0B4J275 112 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 A0A0D9SG52 128 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 RPS2P15880 293 aaKnown RBP16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 OPRM1P35372 400 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 SERPINF1P36955 418 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 PMELP40967 661 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 WNT5AP41221 380 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 NPBWR2P48146 333 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 DAZAP2Q15038 168 aaPredicted RBP16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 SLC9A3R2Q15599 337 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 LRRC37A5PQ49AS3 106 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 COQ8AQ8NI60 647 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF75AQ96N20 296 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 ZNF2Q9BSG1 426 aaPredicted RBP16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 RAB18Q9NP72 206 aa16.96■□□□□ 0.31
PCDHB11-202ENST00000624887 C5orf51A6NDU8 294 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 CD300LBA8K4G0 201 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 OR5H8P0DN80 308 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FUT3P21217 361 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 GPM6AP51674 278 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF345Q14585 488 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 RTP5Q14D33 572 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 ELP2Q6IA86 826 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 BRICD5Q6PL45 260 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 MDP1Q86V88 176 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 TMEM200AQ86VY9 491 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 NMES1Q9C002 83 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 NECAP2Q9NVZ3 263 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 C14orf166Q9Y224 244 aaKnown RBP16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A10PA6NDY2 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A18PA6NE21 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A16PA6NEW6 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A20PA6NIJ5 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A8PA6NJQ4 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A7PA6NKC0 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A22PA8MWA6 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A12PA8MX19 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A5PA8MXJ8 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A23PA8MXZ1 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 EEF1E1-BLOC1S5C9J1V9 151 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A15PP0C7V4 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A13PP0C7W8 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A14PP0C7W9 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 FAM90A24PP0C7X0 464 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 PGAM2P15259 253 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 HAAOP46952 286 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 TAGLNQ01995 201 aaKnown RBP16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 OR5A2Q8NGI9 324 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 DYRK2Q92630 601 aa16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 ZNF629Q9UEG4 869 aaPredicted RBP16.95■□□□□ 0.3
PCDHB11-202ENST00000624887 BET1O15155 118 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 OR2F2O95006 317 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 CALCRP30988 508 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 CYCSP99999 105 aaKnown RBP16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 OR2F1Q13607 317 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 ANKRD55Q3KP44 614 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 DHRS11Q6UWP2 260 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 TFAP2EQ6VUC0 442 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 KCNRGQ8N5I3 272 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 SLC30A7Q8NEW0 376 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 OR5L1Q8NGL2 311 aa16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 PCNPQ8WW12 178 aaKnown RBP16.94■□□□□ 0.3
PCDHB11-202ENST00000624887 KIF25Q9UIL4 384 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms