RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 P2RY4P51582 365 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 RRADP55042 308 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 ZNF321PQ8N8H1 164 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 DMBX1Q8NFW5 382 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 AICDAQ9GZX7 198 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 GSN-AS1Q9NRJ2 163 aa12.94□□□□□ -0.34
VPS36-207ENST00000611132 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 EWSR1Q01844 656 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS36-207ENST00000611132 ZNF90Q03938 601 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 OR13G1Q8NGZ3 307 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 RIMS4Q9H426 269 aaPredicted RBP12.93□□□□□ -0.34
VPS36-207ENST00000611132 IFI6P09912 130 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 LANCL3Q6ZV70 420 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 RAB40CQ96S21 281 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 SLC2A9Q9NRM0 540 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 TCAPO15273 167 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 C1QL1O75973 258 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 SMIM10L1P0DMW3 83 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 HKR1P10072 659 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 PMP22Q01453 160 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 TMEM240Q5SV17 173 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 C8orf44Q96CB5 159 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 CTHRC1Q96CG8 243 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 SMIM10Q96HG1 83 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 HEYLQ9NQ87 328 aaPredicted RBP12.93□□□□□ -0.34
VPS36-207ENST00000611132 IGHV3-15A0A0B4J1V0 119 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 IGHV5-51A0A0C4DH38 117 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 CLEC18AA5D8T8 446 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 PDCD6O75340 191 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 GALNSP34059 522 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 GALR1P47211 349 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 IL24Q13007 206 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 ABHD17BQ5VST6 288 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 CLEC18CQ8NCF0 446 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
VPS36-207ENST00000611132 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
VPS36-207ENST00000611132 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 DEDDO75618 318 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 ID4P47928 161 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 DYNLT3P51808 116 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
VPS36-207ENST00000611132 NXPH2O95156 264 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 ISG15P05161 165 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 ATP6V0CP27449 155 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
VPS36-207ENST00000611132 LY6G6FQ5SQ64 297 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 C5orf66Q9H5L9 145 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 ZDHHC11Q9H8X9 412 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 KCNIP2Q9NS61 270 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 IGLV1-36A0A0B4J1U3 117 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 MASP2O00187 686 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 MBPP02686 304 aaPredicted RBP12.92□□□□□ -0.34
VPS36-207ENST00000611132 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 HAAOP46952 286 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 CLDN15P56746 228 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 TMEM267Q0VDI3 215 aaPredicted RBP12.92□□□□□ -0.34
VPS36-207ENST00000611132 BTNL8Q6UX41 500 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 OR10A7Q8NGE5 316 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 ZNF586Q9NXT0 402 aa12.92□□□□□ -0.34
VPS36-207ENST00000611132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 LMX1BO60663 402 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 CDS2O95674 445 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 CELA2BP08218 269 aaPredicted RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 MGAT2Q10469 447 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 C17orf78Q8N4C9 275 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 MYOTQ9UBF9 498 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 CABIN1Q9Y6J0 2220 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 A0A1B0GTI1 187 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 A0A1W2PP11 408 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 F6UZH7 168 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 FOXS1O43638 330 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 ZNF205O95201 554 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 IL2RAP01589 272 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 B4GALT1P15291 398 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 PPP1CBP62140 327 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 NHLH2Q02577 135 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 PTPMT1Q8WUK0 201 aaPredicted RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 SLC25A28Q96A46 364 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 DUSP23Q9BVJ7 150 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 MSGN1A6NI15 193 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 MLF1P58340 268 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
VPS36-207ENST00000611132 RPS19BP1Q86WX3 136 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms