RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TK1P04183 234 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 GNAO1P09471 354 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 NPBWR2P48146 333 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 KLRD1Q13241 179 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 XAF1Q6GPH4 301 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 OR5AK2Q8NH90 309 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 SPSB1Q96BD6 273 aa15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 METTL8Q9H825 291 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 CAB39Q9Y376 341 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-202ENST00000593764 K7N7A8 449 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 ZNF737O75373 536 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 MELTFP08582 738 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 CCDC159P0C7I6 412 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 CFPP27918 469 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 RPL31P62899 125 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 COL10A1Q03692 680 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 PDZK1IP1Q13113 114 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 IL18R1Q13478 541 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 AWAT1Q58HT5 328 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 OR2G6Q5TZ20 316 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 TMEM200BQ69YZ2 307 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 LAIR2Q6ISS4 152 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 C16orf87Q6PH81 154 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 LHFPL2Q6ZUX7 228 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 MKXQ8IYA7 352 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 FAM185AQ8N0U4 392 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 C11orf42Q8N5U0 333 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 PARP16Q8N5Y8 322 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 SETD9Q8NE22 299 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 OR4M1Q8NGD0 313 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 OR13C9Q8NGT0 318 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 RPS4Y2Q8TD47 263 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 TAF15Q92804 592 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 OPALINQ96PE5 141 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 SPACA5Q96QH8 159 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 FAM234AQ9H0X4 552 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 ZCCHC4Q9H5U6 513 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 RBFOX1Q9NWB1 397 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 IL36RNQ9UBH0 155 aa15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 DIMT1Q9UNQ2 313 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-202ENST00000593764 IGKV1-12A0A0C4DH73 117 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 TRBV2A0A0J9YWF9 115 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 H0YAE9 185 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 SPRY1O43609 319 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 ALX3O95076 343 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 IGKV1D-12P01611 117 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 CHRM2P08172 466 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 BCL3P20749 454 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 CAPGP40121 348 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 POU3F4P49335 361 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 HCP5Q6MZN7 132 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 Q8IYB0 196 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 HAVCR2Q8TDQ0 301 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 RGP1Q92546 391 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 RFT1Q96AA3 541 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 COMMD4Q9H0A8 199 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 SEBOXQ9HB31 216 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 NKX1-2Q9UD57 310 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 CLEC2DQ9UHP7 191 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 SIRT4Q9Y6E7 314 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 HSPE1-MOB4S4R3N1 261 aa15.13■□□□□ 0.01
SHKBP1-202ENST00000593764 TMEM82A0PJX8 343 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 IRGMA1A4Y4 181 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 RPSAP08865 295 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 UBE2E1P51965 193 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 GUCA2AQ02747 115 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 CCDC58Q4VC31 144 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 RPL22L1Q6P5R6 122 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 SERPINA12Q8IW75 414 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 PNKDQ8N490 385 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 TMEM86BQ8N661 226 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 FBLIM1Q8WUP2 373 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 GGHQ92820 318 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 EMG1Q92979 244 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 DCLRE1BQ9H816 532 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 TNFRSF19Q9NS68 423 aa15.12■□□□□ 0.01
SHKBP1-202ENST00000593764 A0A1W2PRD5 423 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 A0A1W2PRF3 423 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 A0A1W2PRM7 423 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 NPFFO15130 113 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ANGPTL7O43827 346 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 LALBAP00709 142 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 CALCBP10092 127 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 DUSP1P28562 367 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 IER3P46695 156 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ERVFRD-1P60508 538 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 FOXL1Q12952 345 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 BLMHQ13867 455 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ZNF273Q14593 569 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ZNF146Q15072 292 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 CDK5R1Q15078 307 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 NCR3LG1Q68D85 454 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ASPHD2Q6ICH7 369 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ZNF529Q6P280 563 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 TMPRSS11AQ6ZMR5 421 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 C17orf107Q6ZR85 190 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 LDLRAD3Q86YD5 345 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 FAM58AQ8N1B3 248 aa15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ASCC1Q8N9N2 400 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-202ENST00000593764 ZNF485Q8NCK3 441 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms