RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 MMP27Q9H306 513 aa12.91□□□□□ -0.34
CRLF3-203ENST00000578692 FBLN5Q9UBX5 448 aa12.91□□□□□ -0.34
CRLF3-203ENST00000578692 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
CRLF3-203ENST00000578692 LOC107986453A0A1B0GWG9 222 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 C17orf98A8MV24 154 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 ENTPD6O75354 484 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 ZNF737O75373 536 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 ALPLP05186 524 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 RBP2P50120 134 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 ATP1B3P54709 279 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 EDDM3BP56851 147 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 MEDAGQ5VYS4 303 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.34
CRLF3-203ENST00000578692 GDPD3Q7L5L3 318 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 OR2G2Q8NGZ5 317 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
CRLF3-203ENST00000578692 SNX22Q96L94 193 aa12.9□□□□□ -0.34
CRLF3-203ENST00000578692 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 EI24O14681 340 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 GABRA5P31644 462 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 DLX6P56179 175 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 OR12D2P58182 307 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 SNRPGP62308 76 aaKnown RBP12.89□□□□□ -0.35
CRLF3-203ENST00000578692 ACTC1P68032 377 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 ACTA1P68133 377 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 ZIK1Q3SY52 487 aaPredicted RBP12.89□□□□□ -0.35
CRLF3-203ENST00000578692 OR8H2Q8N162 312 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 PPP1R35Q8TAP8 253 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 RNFT2Q96EX2 444 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 ADAT3Q96EY9 351 aaPredicted RBP12.89□□□□□ -0.35
CRLF3-203ENST00000578692 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
CRLF3-203ENST00000578692 FRRS1LQ9P0K9 344 aa12.89□□□□□ -0.35
CRLF3-203ENST00000578692 MEX3AA1L020 520 aaKnown RBP12.88□□□□□ -0.35
CRLF3-203ENST00000578692 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 J3QRE1 110 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 CYB5AP00167 134 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 ISG15P05161 165 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF728P0DKX0 622 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 ATF1P18846 271 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 ALDH3A2P51648 485 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
CRLF3-203ENST00000578692 FDX2Q6P4F2 183 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 LHFPL4Q7Z7J7 247 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 Q8IYB0 196 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 ENTHD1Q8IYW4 607 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 PIFOQ8TCI5 191 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
CRLF3-203ENST00000578692 FGGYQ96C11 551 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 RAB18Q9NP72 206 aa12.88□□□□□ -0.35
CRLF3-203ENST00000578692 IGKV1-9A0A0C4DH69 117 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 SNTNA6NMZ2 147 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 E9PQ18 207 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 H3BNX3 289 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 SLC16A6O15403 523 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 HAND1O96004 215 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 RBP4P02753 201 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 ARG1P05089 322 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 HTR1AP08908 422 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 PRKACBP22694 351 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 PEX2P28328 305 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 NPBWR2P48146 333 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 CCR9P51686 369 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 MTCP1P56278 107 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 NANOS3P60323 173 aaKnown RBP12.87□□□□□ -0.35
CRLF3-203ENST00000578692 MEF2CQ06413 473 aaPredicted RBP12.87□□□□□ -0.35
CRLF3-203ENST00000578692 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 FAM58AQ8N1B3 248 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 MALSU1Q96EH3 234 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
CRLF3-203ENST00000578692 SIGLEC9Q9Y336 463 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
CRLF3-203ENST00000578692 hADV38S2A0JD32 116 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 J3QLW9 94 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 IGHV1-8P0DP01 117 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF19P17023 458 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF20P17024 532 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 BCL3P20749 454 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 AZGP1P25311 298 aaKnown RBP12.86□□□□□ -0.35
CRLF3-203ENST00000578692 POU3F4P49335 361 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF91Q05481 1191 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
CRLF3-203ENST00000578692 LIAT1Q6ZQX7 453 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 DYNAPQ8N1N2 210 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 OR52N4Q8NGI2 321 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 ZNF714Q96N38 554 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
CRLF3-203ENST00000578692 RANBP3Q9H6Z4 567 aaPredicted RBP12.86□□□□□ -0.35
CRLF3-203ENST00000578692 RBFOX1Q9NWB1 397 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms