RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PXT1Q8NFP0 134 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 SLAMF9Q96A28 289 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF486Q96H40 463 aaPredicted RBP8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 KCTD7Q96MP8 289 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 UQCC2Q9BRT2 126 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 BARX1Q9HBU1 254 aaPredicted RBP8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 TCF7L1Q9HCS4 588 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 RBFOX1Q9NWB1 397 aaKnown RBP8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 RNF7Q9UBF6 113 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 WIPI2Q9Y4P8 454 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 CSPG4Q6UVK1 2322 aa8.94□□□□□ -0.98
NPIPB3-210ENST00000542817 IGHV3OR15-7A0A075B7D8 119 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 A0A0B4J203 849 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 A0A1B0GW55 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 MEGF11A6BM72 1044 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 A6NLC8 198 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 SLC17A2O00624 439 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 LDLRAD4O15165 306 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 UPK1BO75841 260 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 CDRT1O95170 752 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 ERCC1P07992 297 aaPredicted RBP8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L2P0CJ85 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L3P0CJ86 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L4P0CJ87 422 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L5P0CJ88 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L6P0CJ89 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L7P0CJ90 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 BCL3P20749 454 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 CD80P33681 288 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 POU3F4P49335 361 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 IFITM3Q01628 133 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 IFITM2Q01629 132 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 CLEC12BQ2HXU8 276 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 HFEQ30201 348 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 Q5PR19 223 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 AVPI1Q5T686 147 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 ELP2Q6IA86 826 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4L9Q6RFH8 374 aaPredicted RBP8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 ACP7Q6ZNF0 438 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 BIVMQ86UB2 503 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 AKAP14Q86UN6 197 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 LRRC28Q86X40 367 aaPredicted RBP8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 FAM90A1Q86YD7 464 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 SAXO1Q8IYX7 474 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 TMEM104Q8NE00 496 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 OR51F2Q8NH61 342 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 NDNFQ8TB73 568 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 TNFAIP8L1Q8WVP5 186 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 BARHL1Q9BZE3 327 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 BPESC1Q9GZL8 116 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 NXF2Q9GZY0 626 aaKnown RBP8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 KCNK15Q9H427 330 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 MYOZ1Q9NP98 299 aaPredicted RBP8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF581Q9P0T4 197 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 DUX4Q9UBX2 424 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF222Q9UK12 451 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 EDARQ9UNE0 448 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 NPTNQ9Y639 398 aa8.93□□□□□ -0.98
NPIPB3-210ENST00000542817 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 IGKV1D-17A0A075B6S4 117 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 IGHV4-61A0A0C4DH41 118 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ANKRD34BA5PLL1 514 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 IFITM5A6NNB3 132 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 IFNL4K9M1U5 179 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TRAPPC2P0DI81 140 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TRAPPC2BP0DI82 140 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TMEM225BP0DP42 221 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 CALCBP10092 127 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 SLC2A2P11168 524 aaPredicted RBP8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 RAB3BP20337 219 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ETV6P41212 452 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 NR4A2P43354 598 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 PDLIM4P50479 330 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ART1P52961 327 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 CLDN12P56749 244 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 GMFBP60983 142 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 BTG1P62324 171 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 MXD1Q05195 221 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 UNC119Q13432 240 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TIMM50Q3ZCQ8 353 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ZNF404Q494X3 552 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 STUMQ69YW2 141 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 SFRP4Q6FHJ7 346 aaPredicted RBP8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 GLIPR1L1Q6UWM5 242 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 JAGN1Q8N5M9 183 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 CD177Q8N6Q3 437 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 OR10K1Q8NGX5 313 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ANGPTL6Q8NI99 470 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 FAM168AQ92567 244 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 IL36GQ9NZH8 169 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 METRNQ9UJH8 293 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 GSTK1Q9Y2Q3 226 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 POLDIP2Q9Y2S7 368 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 V9GY05 133 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 ZFHX3Q15911 3703 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 MALRD1Q5VYJ5 2156 aa8.92□□□□□ -0.98
NPIPB3-210ENST00000542817 MTORP42345 2549 aa8.91□□□□□ -0.98
NPIPB3-210ENST00000542817 PPIAL4EA0A075B759 164 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms