RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF728P0DKX0 622 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 POLR2IP36954 125 aaKnown RBP13.62□□□□□ -0.23
CPSF1-207ENST00000531727 RASSF2P50749 326 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 EDDM3BP56851 147 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 GDPD3Q7L5L3 318 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 OR8H2Q8N162 312 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 DYNAPQ8N1N2 210 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 PRSS35Q8N3Z0 413 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 KLHDC1Q8N7A1 406 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 CFHR4Q92496 578 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 SLAMF9Q96A28 289 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 FOXRED1Q96CU9 486 aaPredicted RBP13.62□□□□□ -0.23
CPSF1-207ENST00000531727 C10orf35Q96D05 121 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 ADI1Q9BV57 179 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 GABARAPL3Q9BY60 117 aa13.62□□□□□ -0.23
CPSF1-207ENST00000531727 TBL2Q9Y4P3 447 aaKnown RBP13.62□□□□□ -0.23
CPSF1-207ENST00000531727 ARG1P05089 322 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 ATP6V1E1P36543 226 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 TMED1Q13445 227 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 CNN3Q15417 329 aaKnown RBP13.61□□□□□ -0.23
CPSF1-207ENST00000531727 C1orf146Q5VVC0 180 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 SLC25A26Q70HW3 274 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 OR8J1Q8NGP2 316 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 EME1Q96AY2 570 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 BORCS8Q96FH0 119 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 SNX22Q96L94 193 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 NKX3-1Q99801 234 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-207ENST00000531727 CDCA4Q9BXL8 241 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 RIBC2Q9H4K1 309 aa13.61□□□□□ -0.23
CPSF1-207ENST00000531727 DSCAML1Q8TD84 2053 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 NOTCH1P46531 2555 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 LOC107986453A0A1B0GWG9 222 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 MEX3AA1L020 520 aaKnown RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 INMTO95050 263 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 SERPINA3P01011 423 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 UBCP0CG48 685 aaKnown RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 ISL1P61371 349 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF85Q03923 595 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 MEF2CQ06413 473 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 PLA1AQ53H76 456 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 TCF23Q7RTU1 214 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 FAM220AQ7Z4H9 259 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 Q8IYB0 196 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 C11orf44Q8N8P7 122 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 OR11H6Q8NGC7 330 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 PP6455Q8WZ26 134 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 EMG1Q92979 244 aaKnown RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 RFKQ969G6 155 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 CENPNQ96H22 339 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 SEBOXQ9HB31 216 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-207ENST00000531727 OAZ3Q9UMX2 235 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 TCF19Q9Y242 345 aa13.6□□□□□ -0.23
CPSF1-207ENST00000531727 A0A0G2JK05 382 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 TMEM82A0PJX8 343 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 HAND1O96004 215 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 OPN1MWP04001 364 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 OPN1MW2P0DN77 364 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 OPN1MW3P0DN78 364 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 KIR3DL2P43630 455 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 RAB13P51153 203 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 EDDM3AQ14507 147 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 FAM189A2Q15884 450 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 TP53I3Q53FA7 332 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 LDLRAD2Q5SZI1 272 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 HIST2H2BDQ6DRA6 164 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 CCBE1Q6UXH8 406 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-207ENST00000531727 ENTHD1Q8IYW4 607 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 DNAAF1Q8NEP3 725 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 RPS4Y2Q8TD47 263 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 ZNF702PQ9H963 129 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 ABCB10Q9NRK6 738 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
CPSF1-207ENST00000531727 hADV38S2A0JD32 116 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 A6NDX4 124 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 ATP5HO75947 161 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 PEX2P28328 305 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 RBP2P50120 134 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 ATP1B3P54709 279 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 ZNF91Q05481 1191 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
CPSF1-207ENST00000531727 SSX2Q16385 188 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 RDH10Q8IZV5 341 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 Q8N2B8 174 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-207ENST00000531727 RBFOX1Q9NWB1 397 aaKnown RBP13.58□□□□□ -0.24
CPSF1-207ENST00000531727 IL36RNQ9UBH0 155 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 PITPNC1Q9UKF7 332 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 LINC00312Q9Y6C7 94 aa13.58□□□□□ -0.24
CPSF1-207ENST00000531727 IGKV1-9A0A0C4DH69 117 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 TRBV2A0A0J9YWF9 115 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 CYB5AP00167 134 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms