RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, human

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRPK1-213	ENST00000513367	FAM90A24P	P0C7X0	464 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	LBP	P18428	481 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	DCTD	P32321	178 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	MNDA	P41218	407 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	SLC7A2	P52569	658 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	EDDM3B	P56851	147 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	SCAND1	P57086	179 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ESRRG	P62508	458 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	FAM3A	P98173	230 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZNF45	Q02386	682 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	CFHR3	Q02985	330 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	FADD	Q13158	208 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	SCARB2	Q14108	478 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	KRT71	Q3SY84	523 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	C6orf10	Q5SRN2	563 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	TPTE2P1	Q5T6R2	138 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZBTB49	Q6ZSB9	765 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	TCF23	Q7RTU1	214 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	SLC16A9	Q7RTY1	509 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	MAVS	Q7Z434	540 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	LYG2	Q86SG7	212 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZDHHC23	Q8IYP9	409 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ABHD12	Q8N2K0	398 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	DEFB125	Q8N687	156 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR2AJ1	Q8NGZ0	328 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	MYOZ3	Q8TDC0	251 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	TSEN15	Q8WW01	171 aa	Known RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	RGP1	Q92546	391 aa	Predicted RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	SPTSSA	Q969W0	71 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	RNF170	Q96K19	258 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZNF488	Q96MN9	340 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZNF714	Q96N38	554 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZNF570	Q96NI8	536 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	TSSK2	Q96PF2	358 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR8B4	Q96RC9	309 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZBTB18	Q99592	522 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	THAP7	Q9BT49	309 aa	Predicted RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ELOVL1	Q9BW60	279 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	PAIP1	Q9H074	479 aa	Known RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	NUAK2	Q9H093	628 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR51J1	Q9H342	316 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	PNRC2	Q9NPJ4	139 aa	Known RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	ING3	Q9NXR8	418 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	MED31	Q9Y3C7	131 aa		4.62	□□□□□ -1.67
SRPK1-213	ENST00000513367	FLG2	Q5D862	2391 aa	Predicted RBP	4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	IGHV4OR15-8	A0A075B7B6	117 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367		A0A087WW49	117 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR6C68	A6NDL8	312 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	TMEM210	A6NLX4	147 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZNF850	A8MQ14	1090 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	RRP9	O43818	475 aa	Known RBP	4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	AHCYL1	O43865	530 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	IGLV2-14	P01704	120 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	IFI30	P13284	250 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	VDAC1	P21796	283 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	RBM34	P42696	430 aa	Known RBP	4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	PRKX	P51817	358 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	BDH1	Q02338	343 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	FHL1	Q13642	323 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	PGAM4	Q8N0Y7	254 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	C4orf33	Q8N1A6	199 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR56B4	Q8NH76	319 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR5P3	Q8WZ94	311 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	BPIFA2	Q96DR5	249 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	KCTD7	Q96MP8	289 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	C18orf15	Q96N68	181 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZIM3	Q96PE6	472 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	CHCHD6	Q9BRQ6	235 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	AIG1	Q9NVV5	245 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR14J1	Q9UGF5	321 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	FBXO7	Q9Y3I1	522 aa		4.61	□□□□□ -1.67
SRPK1-213	ENST00000513367	FAT1	Q14517	4588 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	IZUMO1R	A6ND01	250 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	NCBP2L	A6PVI3	153 aa	Known RBP	4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367		H0Y980	276 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	LY6L	H3BQJ8	138 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	BUB1B-PAK6	H3BSN5	160 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367		M0QX08	132 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	DCTN6	O00399	190 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	SOCS2	O14508	198 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	XRCC2	O43543	280 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	RGS11	O94810	467 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	TPPP	O94811	219 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	IGLV1-47	P01700	117 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	IL6	P05231	212 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	CD14	P08571	375 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	VIM	P08670	466 aa	Known RBP	4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	CEACAM3	P40198	252 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	OR1E2	P47887	323 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	GPM6A	P51674	278 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	TAS2R41	P59536	307 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	CD81	P60033	236 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	ZP1	P60852	638 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	TNFRSF9	Q07011	255 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	PRDX4	Q13162	271 aa		4.6	□□□□□ -1.67
SRPK1-213	ENST00000513367	KRR1	Q13601	381 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms