RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 OR10A3P58181 314 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 ELF3P78545 371 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 EIF4EBP1Q13541 118 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 FLOT2Q14254 428 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SHHQ15465 462 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 Q499Y3 187 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 ABCA11PQ4W5N1 156 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 UNQ9165/PRO28630Q6UXU0 137 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SSX7Q7RTT5 188 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 CYP4Z1Q86W10 505 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 OR2AE1Q8NHA4 323 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 IFT81Q8WYA0 676 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 RBMXL1Q96E39 390 aaKnown RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 ASB7Q9H672 318 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 IFT46Q9NQC8 304 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 DIABLOQ9NR28 239 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SIRT7Q9NRC8 400 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 EURLQ9NYK6 297 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 RAB22AQ9UL26 194 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 KLF13Q9Y2Y9 288 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SVILO95425 2214 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGLV4-60A0A075B6I1 120 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGKV1-6A0A0C4DH72 117 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 GOLGA8IPA6NC78 632 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 A8MWL6 223 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 F8VZ95 297 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 M0QXV9 152 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 SLC37A4O43826 429 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 WISP3O95389 354 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGKV1-39P01597 117 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 RLN2P04090 185 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGKV1D-39P04432 117 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 TUFMP49411 452 aaKnown RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 AQP5P55064 265 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 TAS2R43P59537 309 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 C1QTNF8P60827 252 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 RPL10AP62906 217 aaKnown RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 TRIP13Q15645 432 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 TIFABQ6ZNK6 161 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 FAM231DQ6ZW35 169 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 CYP4Z2PQ8N1L4 340 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF555Q8NEP9 628 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 OR2Z1Q8NG97 314 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 CCDC12Q8WUD4 166 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 NELFBQ8WX92 580 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 TNFRSF14Q92956 283 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 MRPL20Q9BYC9 149 aaKnown RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 API5Q9BZZ5 524 aaKnown RBP3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 PARP11Q9NR21 331 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 SDHAF3Q9NRP4 125 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 S4R3C0 116 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 NACADO15069 1562 aa3.24□□□□□ -1.89
HMGB1P47-201ENST00000511281 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF850A8MQ14 1090 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 FABP7O15540 132 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 OR7C2O60412 319 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 RCBTB2O95199 551 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 LHBP01229 141 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 CDK1P06493 297 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF35P13682 527 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 CMC4P56277 68 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 FAM104BQ5XKR9 115 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 SHISA6Q6ZSJ9 500 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 TPGS1Q6ZTW0 290 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 CD302Q8IX05 232 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 FAM57AQ8TBR7 257 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 FAM45AQ8TCE6 357 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 BLNKQ8WV28 456 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 CCL17Q92583 94 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 PITX2Q99697 317 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF251Q9BRH9 671 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 SRRQ9GZT4 340 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 TAS2R5Q9NYW4 299 aa3.23□□□□□ -1.89
HMGB1P47-201ENST00000511281 ABCB11O95342 1321 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 NRCAMQ92823 1304 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 RBFOX3A6NFN3 312 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 FFAR1O14842 300 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 CECR9P0C854 216 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 TSPOP30536 169 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 LGALS7P47929 136 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 PRKCDQ05655 676 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 DMC1Q14565 340 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 COX19Q49B96 90 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 LAMTOR1Q6IAA8 161 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 PRNTQ86SH4 94 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 SLC26A10Q8NG04 563 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 LINC00167Q96N53 147 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 SUCNR1Q9BXA5 334 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 MFSD1Q9H3U5 465 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 RDH14Q9HBH5 336 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 SCML1Q9UN30 329 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 INSIG2Q9Y5U4 225 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 PUS1Q9Y606 427 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 PLA2R1Q13018 1463 aa3.22□□□□□ -1.89
HMGB1P47-201ENST00000511281 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 MYO1DO94832 1006 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms