RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CYR61O00622 381 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 FCGR3BO75015 233 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 SCO1O75880 301 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 SPEM2Q0P670 501 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 OR5I1Q13606 314 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 CLPPQ16740 277 aaPredicted RBP14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 PRSS42Q7Z5A4 293 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNRF4Q8WWF5 429 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 GPR137Q96N19 417 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 MYO7AQ13402 2215 aa14.66□□□□□ -0.06
PCDHA1-203ENST00000504120 HMSDA8MTL9 139 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 TMPRSS13Q9BYE2 586 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 GLRX2Q9NS18 164 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 PSG11Q9UQ72 335 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 A0A1W2PR80 420 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 M0QZ24 198 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 FGF2P09038 288 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 SLC6A1P30531 599 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 TMEM267Q0VDI3 215 aaPredicted RBP14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 SURF2Q15527 256 aaPredicted RBP14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 TRMT61AQ96FX7 289 aaKnown RBP14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 POLR2AP24928 1970 aaKnown RBP14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 A0A1W2PPV9 198 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 OR5C1Q8NGR4 320 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 UBALD1Q8TB05 177 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 PECRQ9BY49 303 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 F5P12259 2224 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 CALCRP30988 508 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 ERVFC1-1P60608 527 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 FFAR4Q5NUL3 377 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 ANGPTL6Q8NI99 470 aa14.65□□□□□ -0.06
PCDHA1-203ENST00000504120 OR2M5A3KFT3 312 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC31A2O15432 143 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 MLF1P58340 268 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 ETFRF1Q6IPR1 90 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 LYG1Q8N1E2 194 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 LRRC29Q8WV35 223 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 GPR87Q9BY21 358 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 FAM117AQ9C073 453 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 GAL3ST2Q9H3Q3 398 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 FKBP11Q9NYL4 201 aa14.65□□□□□ -0.07
PCDHA1-203ENST00000504120 TO15178 435 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 MPGP29372 298 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 ETFDHQ16134 617 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 TMEM108Q6UXF1 575 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 CXXC4Q9H2H0 198 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 CLEC12BQ2HXU8 276 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 OR2C3Q8N628 320 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC24A4Q8NFF2 622 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 FRRS1LQ9P0K9 344 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 MBD1Q9UIS9 605 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 WSB1Q9Y6I7 421 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 CTSDP07339 412 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 KLF3P57682 345 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 FAM109BQ6ICB4 259 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 RFESDQ8TAC1 157 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 TM4SF19Q96DZ7 209 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 PLPPR2Q96GM1 343 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 LRFN3Q9BTN0 628 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 OR5AC1P0C628 307 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 KIR2DL1P43626 348 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 CT55Q8WUE5 264 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 TMPRSS5Q9H3S3 457 aa14.64□□□□□ -0.07
PCDHA1-203ENST00000504120 GNG10P50151 68 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 Q3ZCU0 254 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 NRTNQ99748 197 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 CACNG5Q9UF02 275 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 INHBBP09529 407 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 DEFB124Q8NES8 71 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 YTHDF2Q9Y5A9 579 aaKnown RBP14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 DEFB108AA8MXU0 73 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 LYZL6O75951 148 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 TNFAIP6P98066 277 aaPredicted RBP14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 SKP2Q13309 424 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 PTP4A1Q93096 173 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 hADV38S2A0JD32 116 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 CST2P09228 141 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 CSF2RBP32927 897 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 ASCL1P50553 236 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 HFEQ30201 348 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 OR2D2Q9H210 308 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 TCFL5Q9UL49 500 aa14.63□□□□□ -0.07
PCDHA1-203ENST00000504120 SUMO1P63165 101 aaKnown RBP14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 FAM3AP98173 230 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 TRIP6Q15654 476 aaKnown RBP14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 C1QL3Q5VWW1 255 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 GVQW1Q8N7I0 195 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 RPS4Y2Q8TD47 263 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 RPEQ96AT9 228 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 AAMDCQ9H7C9 122 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 ONECUT1Q9UBC0 465 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC45A2Q9UMX9 530 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 SCN4AP35499 1836 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 PATE4P0C8F1 98 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 ATP6V1FQ16864 119 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 ZNF107Q9UII5 783 aaPredicted RBP14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 FZR1Q9UM11 496 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 V9GYH0 126 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 NCBP2LA6PVI3 153 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms