RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SLC9A3R2Q15599 337 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 CEACAM21Q3KPI0 293 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 AWAT1Q58HT5 328 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 DMRTC1Q5HYR2 192 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 CEACAM19Q7Z692 300 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 OR5A2Q8NGI9 324 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 OR13C9Q8NGT0 318 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 LRRC29Q8WV35 223 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 HPSE2Q8WWQ2 592 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 OR5P3Q8WZ94 311 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 TBX15Q96SF7 602 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 ZCCHC4Q9H5U6 513 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 EXOSC4Q9NPD3 245 aaKnown RBP10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 NDUFB11Q9NX14 153 aa10.5□□□□□ -0.73
SEC61A1-206ENST00000491668 TRAV38-1A0A0B4J264 116 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TRBV5-5A0A0J9YX44 114 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 hCG_1807616A0A1W2PRN6 198 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 OR5B21A6NL26 309 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TRIM64CA6NLI5 447 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 DVL1O14640 695 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 ENSAO43768 121 aaKnown RBP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 HCKP08631 526 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 CD36P16671 472 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 JUNBP17275 347 aaPredicted RBP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 PRKACBP22694 351 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 CFHR2P36980 270 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TGFBR2P37173 567 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 NPY4RP50391 375 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 GP2P55259 537 aaKnown RBP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 RPS11P62280 158 aaKnown RBP eCLIP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 GNG3P63215 75 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 SSX1Q16384 188 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 FAM76BQ5HYJ3 339 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 UTS2BQ765I0 119 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 KRT74Q7RTS7 529 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 PARP16Q8N5Y8 322 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TRMT10AQ8TBZ6 339 aaKnown RBP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 BORCS8Q96FH0 119 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 DERL3Q96Q80 235 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 MS4A7Q9GZW8 240 aaPredicted RBP10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 SLITRK2Q9H156 845 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 PRDM13Q9H4Q3 707 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TCF7L1Q9HCS4 588 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 NOX4Q9NPH5 578 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TAS2R4Q9NYW5 299 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 KAAG1Q9UBP8 84 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 SSR3Q9UNL2 185 aa10.49□□□□□ -0.73
SEC61A1-206ENST00000491668 TMEM210A6NLX4 147 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 ZNF732B4DXR9 585 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 CLDN34H7C241 214 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 GABRPO00591 440 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 CDIPTO14735 213 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 NDUFA2O43678 99 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 SULT1B1O43704 296 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 TFF1P04155 84 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 RNASE1P07998 156 aaKnown RBP10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 HKR1P10072 659 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 ATF1P18846 271 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 AZGP1P25311 298 aaKnown RBP10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 FUT6P51993 359 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 FABP5Q01469 135 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 BAMBIQ13145 260 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 INSL4Q14641 139 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 UBE2V2Q15819 145 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 KCNJ8Q15842 424 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 TIMM50Q3ZCQ8 353 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 HSD17B12Q53GQ0 312 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 RUSC1-AS1Q66K80 236 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 RBMS3Q6XE24 437 aaKnown RBP10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 SATL1Q86VE3 508 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 RPL3LQ92901 407 aaKnown RBP10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 CPNE2Q96FN4 548 aaPredicted RBP10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 GPER1Q99527 375 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 CCL13Q99616 98 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 PCGF1Q9BSM1 259 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 SIRPDQ9H106 197 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 WDR13Q9H1Z4 485 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 STUB1Q9UNE7 303 aa10.48□□□□□ -0.73
SEC61A1-206ENST00000491668 LOC100506127A0A0U1RQW1 187 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 CENPVL3A0A0U1RRI6 287 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 SELLP14151 372 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 RBP2P50120 134 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 ATP1B3P54709 279 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 MTCP1P56278 107 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 CD276Q5ZPR3 534 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 STUMQ69YW2 141 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 LHFPL2Q6ZUX7 228 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 BTN2A1Q7KYR7 527 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 GPR141Q7Z602 305 aa10.47□□□□□ -0.73
SEC61A1-206ENST00000491668 ZNF573Q86YE8 665 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms