RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PSMB9P28065 219 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ELK4P28324 431 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ARL2P36404 184 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 TAGLN2P37802 199 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 KRTAP10-4P60372 401 aaPredicted RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 UBE2MP61081 183 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 RPS15P62841 145 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 FOXF1Q12946 379 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 DOC2AQ14183 400 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 PMVKQ15126 192 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ATP6AP1LQ52LC2 224 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CEP55Q53EZ4 464 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 PRAMEF20Q5VT98 475 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 MLIPQ5VWP3 458 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 LRRC66Q68CR7 880 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 C16orf87Q6PH81 154 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ANGPTL8Q6UXH0 198 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CLEC19AQ6UXS0 136 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CYHR1Q6ZMK1 362 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 DAW1Q8N136 415 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CYB561A3Q8NBI2 242 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 MFSD8Q8NHS3 518 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 UBA3Q8TBC4 463 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 NRGNQ92686 78 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 C9orf72Q96LT7 481 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CHP1Q99653 195 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 GABRG3Q99928 467 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 AICDAQ9GZX7 198 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 OR51B5Q9H339 312 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 TDRD3Q9H7E2 651 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM185BQ9H7F4 350 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CD209Q9NNX6 404 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 PXMP2Q9NR77 195 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 C20orf96Q9NUD7 363 aaPredicted RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 CYB5R1Q9UHQ9 305 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 VPREB3Q9UKI3 123 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 INSIG2Q9Y5U4 225 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 SETD1AO15047 1707 aaKnown RBP0.32□□□□□ -2.36
CCDC93-209ENST00000488908 ADGRB3O60242 1522 aa0.32□□□□□ -2.36
CCDC93-209ENST00000488908 COL6A6A6NMZ7 2263 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 PLXNB3Q9ULL4 1909 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 COL4A2P08572 1712 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 A6NED7 52 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 C17orf98A8MV24 154 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 KLRC4-KLRK1H3BQV0 150 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 J3QT63 122 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 FCN3O75636 299 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 NAPSAO96009 420 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OXTP01178 125 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 PDYNP01213 254 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 LYNX1P0DP58 116 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 CTLA4P16410 223 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 IMPA1P29218 277 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 NBL1P41271 181 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 SSX1Q16384 188 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 C5orf64Q2M2E5 130 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 RPEL1Q2QD12 228 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 CDNFQ49AH0 187 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 SPANXN2Q5MJ10 180 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 SELENOHQ8IZQ5 122 aaKnown RBP0.31□□□□□ -2.36
CCDC93-209ENST00000488908 SLC25A45Q8N413 288 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OR4C16Q8NGL9 310 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OR5C1Q8NGR4 320 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OR52E5Q8NH55 327 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 ZFAND1Q8TCF1 268 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 DCANP1Q8TF63 244 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 UBE2E2Q96LR5 201 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 YPEL4Q96NS1 127 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OPALINQ96PE5 141 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 SPACA5Q96QH8 159 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 NAA38Q9BRA0 125 aaKnown RBP0.31□□□□□ -2.36
CCDC93-209ENST00000488908 PRSS16Q9NQE7 514 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 ADA2Q9NZK5 511 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 OR5V1Q9UGF6 321 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 FBXL3Q9UKT7 428 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 AP3M1Q9Y2T2 418 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 FBN2P35556 2912 aa0.31□□□□□ -2.36
CCDC93-209ENST00000488908 MIA3Q5JRA6 1907 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CRB1P82279 1406 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CCDC88CQ9P219 2028 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 IGHV2OR16-5A0A0B4J2B6 119 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 A0A1B0GTI1 187 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 A0A1W2PRG6 482 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CD300LBA8K4G0 201 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ODF3BA8MYP8 253 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 HACD1B0YJ81 288 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TCAPO15273 167 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 SH2D1AO60880 128 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ETHE1O95571 254 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 GPR75O95800 540 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CATP04040 527 aaKnown RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 PAX6P26367 422 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CLDN6P56747 220 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 YWHAEP62258 255 aaKnown RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 HMGN5P82970 282 aaKnown RBP0.3□□□□□ -2.36
CCDC93-209ENST00000488908 DNAJC3Q13217 504 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 CASP8Q14790 479 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 TMEM241Q24JQ0 296 aa0.3□□□□□ -2.36
CCDC93-209ENST00000488908 ALKBH6Q3KRA9 238 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms