RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	UPRT	Q96BW1	309 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	FGGY	Q96C11	551 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CNBD2	Q96M20	576 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	FGF23	Q9GZV9	251 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PRDM13	Q9H4Q3	707 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	LINC00574	Q9H8X3	128 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZMAT3	Q9HA38	289 aa	Known RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	SPACA1	Q9HBV2	294 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	VCX3A	Q9NNX9	186 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	HMG20A	Q9NP66	347 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	SNTG1	Q9NSN8	517 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	C1orf123	Q9NWV4	160 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	MTCH1	Q9NZJ7	389 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CLN8	Q9UBY8	286 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR5V1	Q9UGF6	321 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GLS2	Q9UI32	602 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	ITGB1BP2	Q9UKP3	347 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	KCNS2	Q9ULS6	477 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	PCDHB10	Q9UN67	800 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	GTF2A1L	Q9UNN4	478 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	CACNG2	Q9Y698	323 aa		4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.24	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGKV1D-17	A0A075B6S4	117 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGKV1-27	A0A075B6S5	117 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGHV2-70D	A0A0C4DH43	119 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	hCG_1809904	A0A1W2PP81	198 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A1W2PPE2	198 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A1W2PR64	198 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	hCG_1807616	A0A1W2PRN6	198 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A1W2PRV1	198 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	TRAPPC2L	H3BP13	241 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		K7N7A8	449 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		M0R1W7	72 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CDC14B	O60729	498 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF737	O75373	536 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CRLF1	O75462	422 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	DIRAS3	O95661	229 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	LY6G6D	O95868	133 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM157C	P0CG43	387 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	PSG2	P11465	335 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	SRM	P19623	302 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	EEF1B2	P24534	225 aa	Known RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF93	P35789	620 aa	Predicted RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	TGFBR2	P37173	567 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	PTGFR	P43088	359 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	GTF2A1	P52655	376 aa	Predicted RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	RPL15	P61313	204 aa	Known RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	GNB2	P62879	340 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	DYNC1I2	Q13409	638 aa	Known RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	MED22	Q15528	200 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	AANAT	Q16613	207 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	DGUOK	Q16854	277 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CR1L	Q2VPA4	569 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		Q3ZCU0	254 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	SPRN	Q5BIV9	151 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	LRRC10	Q5BKY1	277 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CEP78	Q5JTW2	689 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	PRAMEF6	Q5VXH4	476 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	BTNL3	Q6UXE8	466 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	MOB3C	Q70IA8	216 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR2W3	Q7Z3T1	314 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	C1QL2	Q7Z5L3	287 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	LURAP1L	Q8IV03	231 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CROCCP3	Q8IVE0	287 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	RDH10	Q8IZV5	341 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR8H2	Q8N162	312 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM58A	Q8N1B3	248 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR10A7	Q8NGE5	316 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR6M1	Q8NGM8	313 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR13C9	Q8NGT0	318 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR10AC1	Q8NH08	325 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM216A	Q8WUB2	273 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	RAB40A	Q8WXH6	277 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CORO2A	Q92828	525 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	PPP1R14A	Q96A00	147 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	SNX22	Q96L94	193 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR14A2	Q96R54	314 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR5M11	Q96RB7	305 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	BCL7B	Q9BQE9	202 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	DCTN5	Q9BTE1	182 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CENPO	Q9BU64	300 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	TTTY10	Q9BZA0	68 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	CST11	Q9H112	138 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	SLITRK2	Q9H156	845 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	RCC2	Q9P258	522 aa	Known RBP	4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	OPN4	Q9UHM6	478 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525	INSIG2	Q9Y5U4	225 aa		4.23	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A087X0M5	115 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A0G2JK05	382 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A1B0GX30	115 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	ISPD	A4D126	451 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM157A	C9JC47	383 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	LYNX1	G3V0Z9	82 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	CLDN34	H7C241	214 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	GABRP	O00591	440 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	PDCD5	O14737	125 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	SH2D1B	O14796	132 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	MGST3	O14880	152 aa		4.22	□□□□□ -1.73
HDAC6-223	ENST00000480525	WNT9B	O14905	357 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms