RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LPAP08519 4548 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 CCDC154A6NI56 674 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 M0R135 149 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 AZIN1O14977 448 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 TPST1O60507 370 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 CDK2P24941 298 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 DCTDP32321 178 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 GLIPR1P48060 266 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 SLC7A2P52569 658 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 DLK1P80370 383 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 MEF2CQ06413 473 aaPredicted RBP4.75□□□□□ -1.65
HDAC3-206ENST00000471968 EBI3Q14213 229 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 MEP1BQ16820 701 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 TATDN3Q17R31 274 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 ECSCRQ19T08 205 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 SMIM21Q3B7S5 101 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 TM4SF20Q53R12 229 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 ALG10Q5BKT4 473 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 UTF1Q5T230 341 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 ANXA8L1Q5VT79 327 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 OR8J2Q8NGG1 315 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 OR4A5Q8NH83 315 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF799Q96GE5 643 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 RNF170Q96K19 258 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 RHOVQ96L33 236 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 PPP3R2Q96LZ3 170 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF488Q96MN9 340 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 MS4A10Q96PG2 267 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 CHRDL1Q9BU40 450 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 FGF23Q9GZV9 251 aaPredicted RBP4.75□□□□□ -1.65
HDAC3-206ENST00000471968 RNF167Q9H6Y7 350 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 COA3Q9Y2R0 106 aaPredicted RBP4.75□□□□□ -1.65
HDAC3-206ENST00000471968 DNAJC15Q9Y5T4 150 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
HDAC3-206ENST00000471968 NACAE9PAV3 2078 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 TMEM247A6NEH6 219 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 A6NIZ1 184 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 CPSF4LA6NMK7 179 aaKnown RBP4.74□□□□□ -1.65
HDAC3-206ENST00000471968 BMPR1BO00238 502 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 OR7A10O76100 309 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 CHEK2O96017 543 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 IFNA5P01569 189 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 ALDOCP09972 364 aaKnown RBP4.74□□□□□ -1.65
HDAC3-206ENST00000471968 BTF3P20290 206 aaKnown RBP4.74□□□□□ -1.65
HDAC3-206ENST00000471968 CLDN8P56748 225 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 TPPP2P59282 170 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 DSTNP60981 165 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 RAP1BP61224 184 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 RAP1AP62834 184 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 FAM3AP98173 230 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 CASP8Q14790 479 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 DEFB114Q30KQ6 69 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 GTDC1Q4AE62 458 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF613Q6PF04 617 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF621Q6ZSS3 439 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 MOB3BQ86TA1 216 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 LINC00346Q8IVM7 164 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 OR8H3Q8N146 312 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 BATF2Q8N1L9 274 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 TRIML2Q8N7C3 387 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 OR2T10Q8NGZ9 312 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 RAB17Q9H0T7 212 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 OPA3Q9H6K4 179 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 VIPAS39Q9H9C1 493 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 MEPEQ9NQ76 525 aaPredicted RBP4.74□□□□□ -1.65
HDAC3-206ENST00000471968 ZC4H2Q9NQZ6 224 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 RASL12Q9NYN1 266 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 PEMTQ9UBM1 199 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 SLC22A13Q9Y226 551 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 KLHDC2Q9Y2U9 406 aa4.74□□□□□ -1.65
HDAC3-206ENST00000471968 SLC16A7O60669 478 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 SLC2A1P11166 492 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 CDKN2CP42773 168 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 RAB7AP51149 207 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 GPM6AP51674 278 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 F2RL1P55085 397 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 CAV1Q03135 178 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 FAM76BQ5HYJ3 339 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 C6orf136Q5SQH8 315 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF660Q6AZW8 331 aaPredicted RBP4.73□□□□□ -1.65
HDAC3-206ENST00000471968 KCTD20Q7Z5Y7 419 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 OR13C5Q8NGS8 318 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 PFN4Q8NHR9 129 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF671Q8TAW3 534 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 TWIST2Q8WVJ9 160 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 SPTSSAQ969W0 71 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 PANX1Q96RD7 426 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 MCHR1Q99705 422 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 SLC7A7Q9UM01 511 aa4.73□□□□□ -1.65
HDAC3-206ENST00000471968 FOXA2Q9Y261 457 aaPredicted RBP4.73□□□□□ -1.65
HDAC3-206ENST00000471968 AMMECR1Q9Y4X0 333 aaPredicted RBP4.73□□□□□ -1.65
HDAC3-206ENST00000471968 A0A087WUV0 522 aaPredicted RBP4.72□□□□□ -1.65
HDAC3-206ENST00000471968 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
HDAC3-206ENST00000471968 EIF3HO15372 352 aaKnown RBP eCLIP4.72□□□□□ -1.65
HDAC3-206ENST00000471968 MAGEB3O15480 346 aa4.72□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF737O75373 536 aa4.72□□□□□ -1.65
HDAC3-206ENST00000471968 KHDRBS3O75525 346 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms