RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 OR5P3Q8WZ94 311 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 IFT46Q9NQC8 304 aa18.08■□□□□ 0.49
PTPRF-207ENST00000436724 ADGRG4Q8IZF6 3080 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 GEMIN2O14893 280 aaKnown RBP18.08■□□□□ 0.48
PTPRF-207ENST00000436724 CREBL2O60519 120 aaPredicted RBP18.08■□□□□ 0.48
PTPRF-207ENST00000436724 FAM27E3Q08E93 113 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 ARFRP1Q13795 201 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 NKPD1Q17RQ9 610 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 OR52B4Q8NGK2 314 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 SLAMF9Q96A28 289 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 GPN1Q9HCN4 374 aaPredicted RBP18.08■□□□□ 0.48
PTPRF-207ENST00000436724 ZNF835Q9Y2P0 537 aa18.08■□□□□ 0.48
PTPRF-207ENST00000436724 F8VVB4 439 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 F8VWA3 439 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 OR2A4O95047 310 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 CFDP00746 253 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-207ENST00000436724 MPV17P39210 176 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 EXOSC2Q13868 293 aaKnown RBP18.07■□□□□ 0.48
PTPRF-207ENST00000436724 OSR2Q8N2R0 312 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 HIST1H2AAQ96QV6 131 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 OR2A7Q96R45 310 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 GINS4Q9BRT9 223 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 AUP1Q9Y679 476 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 A8MXE2 369 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 CD74P04233 296 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 AMY2AP04746 511 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 CALCRP30988 508 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 TSPAN5P62079 268 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 PSG7Q13046 419 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 BRICD5Q6PL45 260 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 UXS1Q8NBZ7 420 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 OR5A2Q8NGI9 324 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 KLF14Q8TD94 323 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-207ENST00000436724 ST8SIA4Q92187 359 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 FBXW5Q969U6 566 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 HS3ST6Q96QI5 342 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 OBP2BQ9NPH6 170 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 ST3GAL6Q9Y274 331 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 MPC1Q9Y5U8 109 aa18.07■□□□□ 0.48
PTPRF-207ENST00000436724 CACNA1AO00555 2505 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 CADP27708 2225 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 GIPP09681 153 aaPredicted RBP18.06■□□□□ 0.48
PTPRF-207ENST00000436724 ZNF735P0CB33 412 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 ZNF83P51522 516 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 DHODHQ02127 395 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 RBMS2Q15434 407 aaKnown RBP18.06■□□□□ 0.48
PTPRF-207ENST00000436724 C22orf34Q6ZV56 151 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 ANGPTL6Q8NI99 470 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 SLC6A7Q99884 636 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 PLEKHJ1Q9NW61 149 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 IL36GQ9NZH8 169 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 ZNF230Q9UIE0 474 aaPredicted RBP18.06■□□□□ 0.48
PTPRF-207ENST00000436724 FZR1Q9UM11 496 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 AMDHD2Q9Y303 409 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 IGHV2OR16-5A0A0B4J2B6 119 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 PLSCR5A0PG75 271 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 C3orf80F5H4A9 247 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 SYNGR1O43759 233 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 BCL3P20749 454 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 HRH1P35367 487 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 PNLIPRP3Q17RR3 467 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 MAFIPQ8WZ33 124 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 MARS2Q96GW9 593 aaKnown RBP18.06■□□□□ 0.48
PTPRF-207ENST00000436724 CLEC4MQ9H2X3 399 aaPredicted RBP18.06■□□□□ 0.48
PTPRF-207ENST00000436724 MTCH1Q9NZJ7 389 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 TUBD1Q9UJT1 453 aa18.06■□□□□ 0.48
PTPRF-207ENST00000436724 ITPR1Q14643 2758 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 RPS10-NUDT3A0A1W2PQS6 291 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 MSTNO14793 375 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 SNU13P55769 128 aaKnown RBP18.05■□□□□ 0.48
PTPRF-207ENST00000436724 DAZAP2Q15038 168 aaPredicted RBP18.05■□□□□ 0.48
PTPRF-207ENST00000436724 GRK1Q15835 563 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 TIMM23BQ5SRD1 257 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 HAGHLQ6PII5 290 aaPredicted RBP18.05■□□□□ 0.48
PTPRF-207ENST00000436724 BPIFB2Q8N4F0 458 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 HDHD3Q9BSH5 251 aaPredicted RBP18.05■□□□□ 0.48
PTPRF-207ENST00000436724 FAAP24Q9BTP7 215 aa18.05■□□□□ 0.48
PTPRF-207ENST00000436724 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.05■□□□□ 0.483e-7■■■■■ 33.1
PTPRF-207ENST00000436724 ZNF107Q9UII5 783 aaPredicted RBP18.05■□□□□ 0.48
PTPRF-207ENST00000436724 IFNA7P01567 189 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 RAC2P15153 192 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 CXCL2P19875 107 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 OPRM1P35372 400 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 RAP2BP61225 183 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 C2orf68Q2NKX9 166 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 SCGB2B2Q4G0G5 96 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 RNASE10Q5GAN6 216 aaKnown RBP18.04■□□□□ 0.48
PTPRF-207ENST00000436724 IDO2Q6ZQW0 420 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 OR10AD1Q8NGE0 317 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 IGHV3-64DA0A0J9YX35 117 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 PMP2P02689 132 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 UNQ6494/PRO21346Q6UXR6 183 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 ZSCAN4Q8NAM6 433 aaPredicted RBP18.04■□□□□ 0.48
PTPRF-207ENST00000436724 ZNF488Q96MN9 340 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 ST6GALNAC5Q9BVH7 336 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 IL36RNQ9UBH0 155 aa18.04■□□□□ 0.48
PTPRF-207ENST00000436724 RBM11P57052 281 aaKnown RBP18.03■□□□□ 0.48
PTPRF-207ENST00000436724 OPCMLQ14982 345 aa18.03■□□□□ 0.48
PTPRF-207ENST00000436724 PCNPQ8WW12 178 aaKnown RBP18.03■□□□□ 0.48
PTPRF-207ENST00000436724 ZCCHC14Q8WYQ9 949 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms