RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 OR4S1Q8NGB4 309 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR5D18Q8NGL1 313 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR10G8Q8NGN5 311 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR10Q1Q8NGQ4 319 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR52J3Q8NH60 311 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR5AK2Q8NH90 309 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 UBTD2Q8WUN7 234 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SPRYD4Q8WW59 207 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMPDL3AQ92484 453 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDS1Q92903 461 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM159Q96B96 161 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF707Q96C28 371 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CXorf40BQ96DE9 158 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 MUCL1Q96DR8 90 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 S100A16Q96FQ6 103 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 IMP4Q96G21 291 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 AKR1E2Q96JD6 320 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 RNF2Q99496 336 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LPAR4Q99677 370 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 NKX3-1Q99801 234 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 C20orf144Q9BQM9 153 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 FAAP24Q9BTP7 215 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SELENOIQ9C0D9 397 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR2J1Q9GZK6 312 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ELOVL4Q9GZR5 314 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 DEFB129Q9H1M3 183 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARV1Q9H2C2 271 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 AUNIPQ9H7T9 357 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDH20Q9HBT6 801 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 MYOZ2Q9NPC6 264 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 PNO1Q9NRX1 252 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 MRPL17Q9NRX2 175 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CBLN4Q9NTU7 201 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ACER3Q9NUN7 267 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SPG21Q9NZD8 308 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC2A6Q9UGQ3 507 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 FARSAQ9Y285 508 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 STRAPQ9Y3F4 350 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CCL27Q9Y4X3 112 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 RBM7Q9Y580 266 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SBF2Q86WG5 1849 aa2.84□□□□□ -1.96
SDCBPP3-201ENST00000419629 ANKRD31Q8N7Z5 1873 aa2.84□□□□□ -1.96
SDCBPP3-201ENST00000419629 OTOFQ9HC10 1997 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 TRAV30A0A087WSZ9 112 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 A0A087X002 238 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 TRBV6-7A0A0A0MS04 114 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 C5orf51A6NDU8 294 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 FAM183AA6NL82 134 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 SERPINE3A8MV23 424 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 F6UZH7 168 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 H0Y8G0 127 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 H7C423 109 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 DCTN6O00399 190 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 MANBAO00462 879 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CDIPTO14735 213 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 COCHO43405 550 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CDC40O60508 579 aaKnown RBP eCLIP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 FMO6PO60774 539 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 NME6O75414 186 aaPredicted RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 SLCO2B1O94956 709 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 TNFSF15O95150 251 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 SYNGR4O95473 234 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CYB5R3P00387 301 aaPredicted RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 TRBC1P01850 177 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 GAPDHP04406 335 aaKnown RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CTSLP07711 333 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 GTF2F2P13984 249 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 SERPINA2P20848 420 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CCNOP22674 350 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 PRDX3P30048 256 aaKnown RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 HTR1FP30939 366 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 GNRHRP30968 328 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 AKR1C3P42330 323 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CAPZBP47756 277 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 RPL29P47914 159 aaKnown RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 GABRA4P48169 554 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CX3CR1P49238 355 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 RAB28P51157 221 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 NOVA1P51513 510 aaKnown RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 STC1P52823 247 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CRYBB1P53674 252 aaPredicted RBP2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 PAX9P55771 341 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 BACE1P56817 501 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 B3GALT5-AS1P59052 145 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ACTA2P62736 377 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ACTG2P63267 376 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ACTC1P68032 377 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ACTA1P68133 377 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 HIST1H3AP68431 136 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 HTD2P86397 168 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ACVR1Q04771 509 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 CACNG1Q06432 222 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF415Q09FC8 603 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 PRDX4Q13162 271 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ENPP2Q13822 863 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF235Q14590 738 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 GINS1Q14691 196 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 MEF2DQ14814 521 aa2.83□□□□□ -1.96
SDCBPP3-201ENST00000419629 ABRAXAS2Q15018 415 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms