RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OR13C9Q8NGT0 318 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 GCDHQ92947 438 aaPredicted RBP16.68■□□□□ 0.26
GTF3A-202ENST00000419181 TNFRSF14Q92956 283 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 OPALINQ96PE5 141 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 UNKLQ9H9P5 680 aaKnown RBP16.68■□□□□ 0.26
GTF3A-202ENST00000419181 NOX4Q9NPH5 578 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 C19orf12Q9NSK7 152 aa16.68■□□□□ 0.26
GTF3A-202ENST00000419181 TRBV2A0A0J9YWF9 115 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 RNASEK-C17orf49H0YIS7 233 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 HOXA3O43365 443 aaPredicted RBP16.67■□□□□ 0.26
GTF3A-202ENST00000419181 INMTO95050 263 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 TK1P04183 234 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 POU3F4P49335 361 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 CCDC58Q4VC31 144 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 OR2G6Q5TZ20 316 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 XAF1Q6GPH4 301 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 TMPRSS11AQ6ZMR5 421 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 PDZD9Q8IXQ8 264 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 MKXQ8IYA7 352 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 Q8IYB0 196 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 C8orf59Q8N0T1 100 aaPredicted RBP16.67■□□□□ 0.26
GTF3A-202ENST00000419181 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 PARP16Q8N5Y8 322 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 RPS4Y2Q8TD47 263 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 ZDHHC16Q969W1 377 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 SLC25A28Q96A46 364 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 FAM234AQ9H0X4 552 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 ZCCHC4Q9H5U6 513 aa16.67■□□□□ 0.26
GTF3A-202ENST00000419181 METTL8Q9H825 291 aaKnown RBP16.67■□□□□ 0.26
GTF3A-202ENST00000419181 NKX1-2Q9UD57 310 aaPredicted RBP16.67■□□□□ 0.26
GTF3A-202ENST00000419181 EXOSC1Q9Y3B2 195 aaKnown RBP16.67■□□□□ 0.26
GTF3A-202ENST00000419181 ZNF737O75373 536 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 MYL12AP19105 171 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 DLX1P56177 255 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 RPL31P62899 125 aaKnown RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 COL10A1Q03692 680 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 PRB3Q04118 309 aaPredicted RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 CDK5R1Q15078 307 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 LAIR2Q6ISS4 152 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 RPL22L1Q6P5R6 122 aaKnown RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 Q6YL49 198 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 FAM185AQ8N0U4 392 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 FBLIM1Q8WUP2 373 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 RGP1Q92546 391 aaPredicted RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 EMG1Q92979 244 aaKnown RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 TMEM80Q96HE8 168 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 VCXQ9H320 206 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 RBFOX1Q9NWB1 397 aaKnown RBP16.66■□□□□ 0.26
GTF3A-202ENST00000419181 DHDHQ9UQ10 334 aa16.66■□□□□ 0.26
GTF3A-202ENST00000419181 DSCAML1Q8TD84 2053 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 A0A0U1RQK1 487 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 K7N7A8 449 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 SPRY1O43609 319 aaPredicted RBP16.65■□□□□ 0.26
GTF3A-202ENST00000419181 ALX3O95076 343 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 CYB5AP00167 134 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 CHRM2P08172 466 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 OCM2P0CE71 109 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 OCMP0CE72 109 aaPredicted RBP16.65■□□□□ 0.26
GTF3A-202ENST00000419181 PIPP12273 146 aaPredicted RBP16.65■□□□□ 0.26
GTF3A-202ENST00000419181 NPBWR2P48146 333 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 GUCA2AQ02747 115 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 PDZK1IP1Q13113 114 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 BLMHQ13867 455 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 CRIP3Q6Q6R5 217 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 RNF144BQ7Z419 303 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 SERPINA12Q8IW75 414 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 OR5D14Q8NGL3 314 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 TSEN15Q8WW01 171 aaKnown RBP16.65■□□□□ 0.26
GTF3A-202ENST00000419181 GGHQ92820 318 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 SPACA5Q96QH8 159 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 SEBOXQ9HB31 216 aaPredicted RBP16.65■□□□□ 0.26
GTF3A-202ENST00000419181 IL36RNQ9UBH0 155 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 CLEC2DQ9UHP7 191 aa16.65■□□□□ 0.26
GTF3A-202ENST00000419181 IGKV1-12A0A0C4DH73 117 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 SULT1B1O43704 296 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 IGKV1D-12P01611 117 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 MELTFP08582 738 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 HKR1P10072 659 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 BCL3P20749 454 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 SLC34A1Q06495 639 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 KLRD1Q13241 179 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 NCR3LG1Q68D85 454 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 TMEM200BQ69YZ2 307 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 FAM58AQ8N1B3 248 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 ASCC1Q8N9N2 400 aaKnown RBP16.64■□□□□ 0.25
GTF3A-202ENST00000419181 TFAP2CQ92754 450 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 RFT1Q96AA3 541 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 NEK6Q9HC98 313 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 BABAM2Q9NXR7 383 aa16.64■□□□□ 0.25
GTF3A-202ENST00000419181 SIRT4Q9Y6E7 314 aaPredicted RBP16.64■□□□□ 0.25
GTF3A-202ENST00000419181 EFCAB10A6NFE3 127 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 ANGPTL7O43827 346 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 HAND1O96004 215 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 LALBAP00709 142 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 ST3GAL4Q11206 333 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 MED21Q13503 144 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 ZNF146Q15072 292 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 ZNF529Q6P280 563 aa16.63■□□□□ 0.25
GTF3A-202ENST00000419181 FIP1L1Q6UN15 594 aaKnown RBP16.63■□□□□ 0.25
GTF3A-202ENST00000419181 LDLRAD3Q86YD5 345 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms