RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CAMK2N2Q96S95 79 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLC19A3Q9BZV2 496 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 NXF2Q9GZY0 626 aaKnown RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 DRC3Q9H069 523 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 EDA2RQ9HAV5 297 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 RDH14Q9HBH5 336 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 ASCL3Q9NQ33 180 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 DDX19AQ9NUU7 478 aaKnown RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 USP42Q9H9J4 1324 aaKnown RBP2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 PLB1Q6P1J6 1458 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 MYO15BQ96JP2 1530 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 CCDC180Q9P1Z9 1646 aa2.05□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGKV1-27A0A075B6S5 117 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGHV3OR16-9A0A0B4J2B5 98 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 A0A0J9YXV3 536 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 H0YJW9 148 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 J3QT63 122 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZNF593O00488 134 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 GPR171O14626 319 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 CDC40O60508 579 aaKnown RBP eCLIP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ATP5HO75947 161 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ELP1O95163 1332 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TTC4O95801 387 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGKV5-2P06315 115 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 SERPINA6P08185 405 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 PET100P0DJ07 73 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 GIMD1P0DJR0 217 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ERGP11308 486 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZNF35P13682 527 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZNF7P17097 686 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 RAB3BP20337 219 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 COL8A2P25067 703 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 F2RP25116 425 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TUFMP49411 452 aaKnown RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 FADDQ13158 208 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ORMDL2Q53FV1 153 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 SAPCD1Q5SSQ6 148 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 MED27Q6P2C8 311 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 DRAM2Q6UX65 266 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 SLC16A13Q7RTY0 426 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 PRSS58Q8IYP2 241 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZCCHC24Q8N2G6 241 aaKnown RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 METTL13Q8N6R0 699 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR5M1Q8NGP8 315 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 ACTL9Q8TC94 416 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 DOK4Q8TEW6 326 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 GALNT14Q96FL9 552 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 BTN2A3PQ96KV6 586 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TMEM56Q96MV1 263 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TIMM17AQ99595 171 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 GPR22Q99680 433 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 SAMD10Q9BYL1 202 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 COA1Q9GZY4 146 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 PRORYQ9H606 182 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 C6orf50Q9HD87 102 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 MYOZ1Q9NP98 299 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 RRAGDQ9NQL2 400 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 FBXO6Q9NRD1 293 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TAS2R13Q9NYV9 303 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 IL20Q9NYY1 176 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 TFR2Q9UP52 801 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 LRRC42Q9Y546 428 aa2.04□□□□□ -2.08
HMGB1P49-201ENST00000418882 AHDC1Q5TGY3 1603 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 IGHV1OR15-9A0A0B4J2B8 117 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 SYCE1LA8MT33 242 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 VGLL3A8MV65 326 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 F5H768 121 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 DEXIO95424 95 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 IL4P05112 153 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CD3GP09693 182 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 NEFHP12036 1026 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 DTYMKP23919 212 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 GRPRP30550 384 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 POLR2IP36954 125 aaKnown RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 PPP1R2P41236 205 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 ACTR1BP42025 376 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 PSMD7P51665 324 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 STC1P52823 247 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 RHOAP61586 193 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 C4orf26Q17RF5 130 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 RGS21Q2M5E4 152 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CEACAM16Q2WEN9 425 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 TMEM249Q2WGJ8 235 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CEACAM21Q3KPI0 293 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 THEM4Q5T1C6 240 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 TMEM236Q5W0B7 351 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 STEAP4Q687X5 459 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 HBMQ6B0K9 141 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 PPP1R2P3Q6NXS1 205 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 UNQ9165/PRO28630Q6UXU0 137 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 SSX7Q7RTT5 188 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 MRPL52Q86TS9 123 aaKnown RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CALHM3Q86XJ0 350 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 TMEM251Q8N6I4 163 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR8G5Q8NG78 346 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR5L1Q8NGL2 311 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 OR5AK3PQ8NH89 298 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 IFT81Q8WYA0 676 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CDS1Q92903 461 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms