RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MKXQ8IYA7 352 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 OR5M8Q8NGP6 311 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 ELMOD3Q96FG2 381 aa17.77■□□□□ 0.43
USP39-203ENST00000409470 TRAPPC2LH3BP13 241 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 J3QW42 95 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 MSTNO14793 375 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 SMPD2O60906 423 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 NOS1APO75052 506 aaPredicted RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 HOXB1P14653 301 aaPredicted RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 FUT3P21217 361 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 NFYAP23511 347 aaPredicted RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 FOXC1Q12948 553 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 LPCAT3Q6P1A2 487 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 CCDC120Q96HB5 630 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 PDCD10Q9BUL8 212 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 ZNF442Q9H7R0 627 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 DKK4Q9UBT3 224 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 RRP8O43159 456 aaKnown RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 DUS4LO95620 317 aaKnown RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 PI3P19957 117 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 SPINK2P20155 84 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 COX5AP20674 150 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 CA6P23280 308 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 GMFBP60983 142 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 PPP1CBP62140 327 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 KCTD9Q7L273 389 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 TMEM200AQ86VY9 491 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 TMEM185AQ8NFB2 350 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 Q8NFD4 153 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 POM121Q96HA1 1249 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 C1QTNF6Q9BXI9 259 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 CLEC4MQ9H2X3 399 aaPredicted RBP17.76■□□□□ 0.43
USP39-203ENST00000409470 PLSCR4Q9NRQ2 329 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 PROCRQ9UNN8 238 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 LHX6Q9UPM6 363 aa17.76■□□□□ 0.43
USP39-203ENST00000409470 FRYQ5TBA9 3013 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 AKAP13Q12802 2813 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 FXYD6-FXYD2A0A087WZ82 144 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 FAM221AA4D161 298 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 OR5H14A6NHG9 310 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 OR5B21A6NL26 309 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 K7EM74 188 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 L7N2F9 121 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 CCSO14618 274 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 SNAPC5O75971 98 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 C4BPBP20851 252 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 FGF12P61328 243 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 GNG3P63215 75 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 ELP2Q6IA86 826 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 HAGHLQ6PII5 290 aaPredicted RBP17.75■□□□□ 0.43
USP39-203ENST00000409470 PEG10Q86TG7 708 aaKnown RBP17.75■□□□□ 0.43
USP39-203ENST00000409470 RBMXL3Q8N7X1 1067 aaKnown RBP17.75■□□□□ 0.43
USP39-203ENST00000409470 C1orf162Q8NEQ5 155 aaPredicted RBP17.75■□□□□ 0.43
USP39-203ENST00000409470 LILRB4Q8NHJ6 448 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 DPCDQ9BVM2 203 aaPredicted RBP17.75■□□□□ 0.43
USP39-203ENST00000409470 FXYD6Q9H0Q3 95 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 MTCH1Q9NZJ7 389 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 LUZP4Q9P127 313 aa17.75■□□□□ 0.43
USP39-203ENST00000409470 PGAM2P15259 253 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 CXCL2P19875 107 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 HTR2BP41595 481 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 SEC61A1P61619 476 aaKnown RBP17.74■□□□□ 0.43
USP39-203ENST00000409470 SORDQ00796 357 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 TEX261Q6UWH6 196 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FBXW12Q6X9E4 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 ZNF573Q86YE8 665 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 ZNF2Q9BSG1 426 aaPredicted RBP17.74■□□□□ 0.43
USP39-203ENST00000409470 OR2J1Q9GZK6 312 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 HEXA-AS1Q9H8Q6 139 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 U3KQ87 197 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A10PA6NDY2 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A18PA6NE21 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A16PA6NEW6 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A20PA6NIJ5 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A8PA6NJQ4 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A7PA6NKC0 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A22PA8MWA6 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A12PA8MX19 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A5PA8MXJ8 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A23PA8MXZ1 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM25EA8MYX2 175 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 F8VVB4 439 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 F8VWA3 439 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 ARPC5O15511 151 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 SYNGR1O43759 233 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 AGFG2O95081 481 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A15PP0C7V4 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A13PP0C7W8 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A14PP0C7W9 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 FAM90A24PP0C7X0 464 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 CBR1P16152 277 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 ZNF610Q8N9Z0 462 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 TMEM230Q96A57 120 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 RTBDNQ9BSG5 229 aaPredicted RBP17.74■□□□□ 0.43
USP39-203ENST00000409470 NECAP2Q9NVZ3 263 aa17.74■□□□□ 0.43
USP39-203ENST00000409470 MCRIP1C9JLW8 97 aa17.73■□□□□ 0.43
USP39-203ENST00000409470 M0R233 179 aa17.73■□□□□ 0.43
USP39-203ENST00000409470 TNFSF13O75888 250 aa17.73■□□□□ 0.43
USP39-203ENST00000409470 CRYABP02511 175 aaKnown RBP17.73■□□□□ 0.43
USP39-203ENST00000409470 OR5H8P0DN80 308 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms