RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RHOFQ9HBH0 211 aa15.42■□□□□ 0.06
TMEM53-201ENST00000372235 NBEAL1Q6ZS30 2694 aa15.42■□□□□ 0.06
TMEM53-201ENST00000372235 EI24O14681 340 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 SLC16A6O15403 523 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 APOL3O95236 402 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 HTR1AP08908 422 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 ZNF85Q03923 595 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 LRRC75BQ2VPJ9 315 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 TP53I3Q53FA7 332 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 LHFPL2Q6ZUX7 228 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 OR8H2Q8N162 312 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 PRSS35Q8N3Z0 413 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 OR2G2Q8NGZ5 317 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 TAF15Q92804 592 aaKnown RBP eCLIP15.41■□□□□ 0.06
TMEM53-201ENST00000372235 SNX22Q96L94 193 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 SSX3Q99909 188 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 HHLA2Q9UM44 414 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 PCDHGB5Q9Y5G0 923 aa15.41■□□□□ 0.06
TMEM53-201ENST00000372235 H3BUI4 141 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 ENTPD6O75354 484 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 PEX2P28328 305 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 MTCP1P56278 107 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 PROK1P58294 105 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 COL10A1Q03692 680 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 KPNB1Q14974 876 aaKnown RBP15.4■□□□□ 0.06
TMEM53-201ENST00000372235 SPIN3Q5JUX0 258 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 Q6ZSV7 163 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 SLC25A26Q70HW3 274 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 OR4M1Q8NGD0 313 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 FOXRED1Q96CU9 486 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-201ENST00000372235 CDCA4Q9BXL8 241 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 MMP27Q9H306 513 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 RANBP3Q9H6Z4 567 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-201ENST00000372235 TCF7L1Q9HCS4 588 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 INPP5EQ9NRR6 644 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 MTCH1Q9NZJ7 389 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 FBLN5Q9UBX5 448 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 TBL2Q9Y4P3 447 aaKnown RBP15.4■□□□□ 0.06
TMEM53-201ENST00000372235 GMPPBQ9Y5P6 360 aa15.4■□□□□ 0.06
TMEM53-201ENST00000372235 hADV38S2A0JD32 116 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 FUOMA2VDF0 154 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 C17orf98A8MV24 154 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 H3BUX3 64 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 FADS2O95864 444 aaKnown RBP15.39■□□□□ 0.05
TMEM53-201ENST00000372235 ZNF728P0DKX0 622 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 EDDM3BP56851 147 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 HCP5Q6MZN7 132 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 ZBTB49Q6ZSB9 765 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 EMG1Q92979 244 aaKnown RBP15.39■□□□□ 0.05
TMEM53-201ENST00000372235 SLAMF9Q96A28 289 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 MBOAT4Q96T53 435 aa15.39■□□□□ 0.05
TMEM53-201ENST00000372235 EXOGQ9Y2C4 368 aaKnown RBP15.39■□□□□ 0.05
TMEM53-201ENST00000372235 TRBV2A0A0J9YWF9 115 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 J3QRE1 110 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 ATF1P18846 271 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 CEBPDP49716 269 aaPredicted RBP15.38■□□□□ 0.05
TMEM53-201ENST00000372235 DLX1P56177 255 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 FAM58AQ8N1B3 248 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 SYS1Q8N2H4 156 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 PNKDQ8N490 385 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 CBR4Q8N4T8 237 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 C11orf42Q8N5U0 333 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 OR4C13Q8NGP0 309 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 MALSU1Q96EH3 234 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 CPNE2Q96FN4 548 aaPredicted RBP15.38■□□□□ 0.05
TMEM53-201ENST00000372235 ZNF714Q96N38 554 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 PPA2Q9H2U2 334 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 FRRS1LQ9P0K9 344 aa15.38■□□□□ 0.05
TMEM53-201ENST00000372235 H3BNX3 289 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 ZNF737O75373 536 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 HAND1O96004 215 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 MT-ND2P03891 347 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 AZGP1P25311 298 aaKnown RBP15.37■□□□□ 0.05
TMEM53-201ENST00000372235 GABRA5P31644 462 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 KIR3DL2P43630 455 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 PRB3Q04118 309 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-201ENST00000372235 GALEQ14376 348 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 ZNF146Q15072 292 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 ZIK1Q3SY52 487 aaPredicted RBP15.37■□□□□ 0.05
TMEM53-201ENST00000372235 UBE2FQ969M7 185 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 FGGYQ96C11 551 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 OPALINQ96PE5 141 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 NPFFR1Q9GZQ6 430 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 PITPNC1Q9UKF7 332 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 LINC00312Q9Y6C7 94 aa15.37■□□□□ 0.05
TMEM53-201ENST00000372235 IGKV1-27A0A075B6S5 117 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 VGLL3A8MV65 326 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 E9PQ18 207 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 H3BSH0 61 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 J3QLW9 94 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 EBAG9O00559 213 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 SH2D1BO14796 132 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 MGST3O14880 152 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 CCDC159P0C7I6 412 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 CCL3L1P16619 93 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 ZNF19P17023 458 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 ERP29P30040 261 aaKnown RBP15.36■□□□□ 0.05
TMEM53-201ENST00000372235 KIR2DS4P43632 304 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 OR12D2P58182 307 aa15.36■□□□□ 0.05
TMEM53-201ENST00000372235 RAB40BQ12829 278 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms