RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LIMS4P0CW20 117 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF17P17021 662 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ATP5A1P25705 553 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FMO3P31513 532 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 LEPP41159 167 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 GLP1RP43220 463 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 NKX2-1P43699 371 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 BDKRB1P46663 353 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SULT1A1P50225 295 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SULT1A2P50226 295 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 CDKN2DP55273 166 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TCL1AP56279 114 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TCTAP57738 103 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 LINC00205P59089 165 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 RPS20P60866 119 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 CNTN1Q12860 1018 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR2F1Q13607 317 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 GPR18Q14330 331 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ATXN7L3Q14CW9 347 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SURF2Q15527 256 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF630Q2M218 657 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TTLL9Q3SXZ7 439 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF260Q3ZCT1 412 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF585BQ52M93 769 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PYCR3Q53H96 274 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PRR30Q53SZ7 412 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ATAD3CQ5T2N8 411 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 GPRC6AQ5T6X5 926 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM78BQ5VT40 261 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 CARM1Q86X55 608 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 RAB43Q86YS6 212 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 BLIDQ8IZY5 108 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ABHD12Q8N2K0 398 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SLC25A45Q8N413 288 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ARRDC1Q8N5I2 433 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 IQCF1Q8N6M8 205 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR2Z1Q8NG97 314 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR1B1Q8NGR6 318 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR13G1Q8NGZ3 307 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR1P1Q8NH06 330 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 Q8WTZ3 238 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TFB1MQ8WVM0 346 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 HPSE2Q8WWQ2 592 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 UBE2E3Q969T4 207 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 IMP4Q96G21 291 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF641Q96N77 438 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 APOL4Q9BPW4 351 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FAIM2Q9BWQ8 316 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OSBPL11Q9BXB4 747 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PECRQ9BY49 303 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 FAM234AQ9H0X4 552 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 AMBNQ9NP70 447 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 VPS29Q9UBQ0 182 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PRODH2Q9UF12 536 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 UBQLN1Q9UMX0 589 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 TCF19Q9Y242 345 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 OR1A2Q9Y585 309 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 COLEC10Q9Y6Z7 277 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 CITO14578 2027 aa4.27□□□□□ -1.73
ECHDC1-204ENST00000368292 PRRC2AP48634 2157 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CENPVL3A0A0U1RRI6 287 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 A0A1B0GU03 582 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 SMIM28A0A1B0GU29 152 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 ANKRD65E5RJM6 399 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 TRAPPC2LH3BP13 241 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 ZNF195O14628 629 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 ITM2AO43736 263 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 ZIC3O60481 467 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CDC40O60508 579 aaKnown RBP eCLIP4.26□□□□□ -1.731e-6■□□□□ 9.9
ECHDC1-204ENST00000368292 GGCTO75223 188 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 UGT2B11O75310 529 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 NTN1O95631 604 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 HAND1O96004 215 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 TOMM40O96008 361 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CA1P00915 261 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 IGF2P01344 180 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 IGHG3P01860 377 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 C1QCP02747 245 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 HOXD4P09016 255 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 MBL2P11226 248 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CD99P14209 185 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 ABOP16442 354 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 HTR1EP28566 365 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 GCAP28676 217 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CEACAM8P31997 349 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 FOXN2P32314 431 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 OR3A4PP47883 348 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 SGSHP51688 502 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 PGGT1BP53609 377 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 CTSCP53634 463 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 PAX9P55771 341 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 WNT4P56705 351 aa4.26□□□□□ -1.73
ECHDC1-204ENST00000368292 TAS2R31P59538 309 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms