RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 SELENOHQ8IZQ5 122 aaKnown RBP3.59□□□□□ -1.84
USH2A-202ENST00000366942 SLC25A45Q8N413 288 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 TSKUQ8WUA8 353 aa3.59□□□□□ -1.84
USH2A-202ENST00000366942 KCNE1BA0A087WTH5 132 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 P2RX6O15547 441 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 PMS2P2O95744 297 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 PROCP04070 461 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 MRPL3P09001 348 aaKnown RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 CDKN1BP46527 198 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 RPL8P62917 257 aaKnown RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 HLXQ14774 488 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 C6orf136Q5SQH8 315 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SIGIRRQ6IA17 410 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SLC25A26Q70HW3 274 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SLC35B4Q969S0 331 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LURAP1Q96LR2 239 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 OR52A5Q9H2C5 316 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ARMC1Q9NVT9 282 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LGALS13Q9UHV8 139 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 NAGKQ9UJ70 344 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SLC22A13Q9Y226 551 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ABCA1O95477 2261 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 A0A1W2PR80 420 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CDHR4A6H8M9 788 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SIX3O95343 332 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 EFEMP2O95967 443 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 MAS1P04201 325 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CTSLP07711 333 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 HLA-DOBP13765 273 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 NTF4P34130 210 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 OR2B8PP59922 312 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ACSM1Q08AH1 577 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZNF460Q14592 562 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TAF9Q16594 264 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 HES5Q5TA89 166 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TSPO2Q5TGU0 170 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ALKAL1Q6UXT8 129 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 DBX2Q6ZNG2 339 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CLEC17AQ6ZS10 378 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LRP10Q7Z4F1 713 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 OR6X1Q8NH79 312 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZNRF4Q8WWF5 429 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 FUZQ9BT04 418 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 BCL2L10Q9HD36 194 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 GLI3P10071 1580 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CRYBG1Q9Y4K1 1723 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 FMN2Q9NZ56 1722 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LOC285095A0A1B0GVY8 99 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 NPIPB11E5RHQ5 1161 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TAAR5O14804 337 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CST2P09228 141 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 IL7P13232 177 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 CA6P23280 308 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 S100A2P29034 98 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 MTNR1BP49286 362 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 INSL3P51460 131 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SSTP61278 116 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 B2MP61769 119 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 GUK1Q16774 197 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ACSF3Q4G176 576 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 KIRREL2Q6UWL6 708 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SAMD12Q8N8I0 201 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 MRPS18BQ9Y676 258 aaKnown RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 IGHV1-45A0A0A0MS14 117 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 IQCF6A8MYZ5 107 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 HCRTO43612 131 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SOX15O60248 233 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ERP29P30040 261 aaKnown RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 KLK7P49862 253 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 PPOXP50336 477 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZIK1Q3SY52 487 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 MRPL14Q6P1L8 145 aaKnown RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 CEACAM19Q7Z692 300 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TMEM99Q8N816 258 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SLAMF6Q96DU3 332 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ANGPTL4Q9BY76 406 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LYRM2Q9NU23 88 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZNF107Q9UII5 783 aaPredicted RBP3.58□□□□□ -1.84
USH2A-202ENST00000366942 PYCARDQ9ULZ3 195 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 WSB1Q9Y6I7 421 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LRP5O75197 1615 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 IGLV3-10A0A075B6K4 115 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TRAV40A0A0B4J280 105 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 A0A1W2PQD3 144 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 A0A1W2PQF6 199 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 SHISA3A0PJX4 238 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ACSM4P0C7M7 580 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 HOXC8P31273 242 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 IQCJQ1A5X6 159 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 ZNF404Q494X3 552 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 LDLRAD2Q5SZI1 272 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 Q6ZWC4 215 aa3.58□□□□□ -1.84
USH2A-202ENST00000366942 TCF23Q7RTU1 214 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms