RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FAM122BQ7Z309 247 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TPRA1Q86W33 373 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PHC2Q8IXK0 858 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 ARIH2OSQ8N7S6 290 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TMEM99Q8N816 258 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 YIPF7Q8N8F6 280 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 LRRC75AQ8NAA5 344 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 OR6N2Q8NGY6 317 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NDNFQ8TB73 568 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 DYNC2LI1Q8TCX1 351 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 FGF11Q92914 225 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PTP4A1Q93096 173 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 C4orf36Q96KX1 117 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 SFXN2Q96NB2 322 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 AGAP4Q96P64 663 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 OXGR1Q96P68 337 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 MED18Q9BUE0 208 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 TMED9Q9BVK6 235 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 NMNAT2Q9BZQ4 307 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 OR11A1Q9GZK7 315 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 C6orf62Q9GZU0 229 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 SLITRK2Q9H156 845 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 OR51E2Q9H255 320 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 SYT4Q9H2B2 425 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 WDR76Q9H967 626 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PALMDQ9NP74 551 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 B3GAT2Q9NPZ5 323 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 PAQR5Q9NXK6 330 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 ZNF69Q9UC07 566 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 CLEC2DQ9UHP7 191 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 IKZF2Q9UKS7 526 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 RPH3AQ9Y2J0 694 aaPredicted RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 POLR1DQ9Y2S0 133 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 MRPS18CQ9Y3D5 142 aaKnown RBP3.99□□□□□ -1.77
VPS29-212ENST00000621131 KNTC1P50748 2209 aa3.99□□□□□ -1.77
VPS29-212ENST00000621131 ARPC4-TTLL3A0A0A6YYG9 625 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TRBV2A0A0J9YWF9 115 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PQ09 198 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PQL4 384 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 METTL15A6NJ78 407 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 FTCDNL1E5RQL4 147 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 LOC110117498-PIK3R3F6TDL0 507 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 G3V3Y1 287 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 H7C1C5 153 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 RGS5O15539 181 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SELENOFO60613 162 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ZNF354AO60765 605 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 GATBO75879 557 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 SULT1C4O75897 302 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 AKR7A3O95154 331 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SYNGR4O95473 234 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 CLUP10909 449 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SLC2A2P11168 524 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 FGF9P31371 208 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 PYCR1P32322 319 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SDC2P34741 201 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 DNASE1L1P49184 302 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TGM4P49221 684 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 BIDP55957 195 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 LCN6P62502 163 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 RPS25P62851 125 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 PPP3R1P63098 170 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ARG2P78540 354 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ZNF45Q02386 682 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ZNF85Q03923 595 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 RASGEF1BQ0VAM2 473 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 AQP6Q13520 282 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 EIF2B1Q14232 305 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 OR1C1Q15619 314 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SSX1Q16384 188 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ZNF829Q3KNS6 432 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TP53I3Q53FA7 332 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 THEM4Q5T1C6 240 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 HBMQ6B0K9 141 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 C22orf42Q6IC83 251 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ARL9Q6T311 187 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TMPPEQ6ZT21 453 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 KRT77Q7Z794 578 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SLC22A16Q86VW1 577 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 NOXO1Q8NFA2 376 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 OR51L1Q8NGJ5 315 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 OR6N1Q8NGY5 312 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 THEM6Q8WUY1 208 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 ACOT12Q8WYK0 555 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 PHYHIPQ92561 330 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 NSMAFQ92636 917 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 RPL3LQ92901 407 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 TMEM203Q969S6 136 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 CPNE4Q96A23 557 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 DNAJA3Q96EY1 480 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 HCAR1Q9BXC0 346 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 MROQ9BYG7 248 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 EXO5Q9H790 373 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TMEM185BQ9H7F4 350 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SH2D2AQ9NP31 389 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms