RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RNF122Q9H9V4 155 aa5□□□□□ -1.61
SDF2-206ENST00000587788 CA10Q9NS85 328 aa5□□□□□ -1.61
SDF2-206ENST00000587788 DEPPQ9NTK1 212 aa5□□□□□ -1.61
SDF2-206ENST00000587788 MED9Q9NWA0 146 aa5□□□□□ -1.61
SDF2-206ENST00000587788 PARPBPQ9NWS1 579 aa5□□□□□ -1.61
SDF2-206ENST00000587788 COMMD9Q9P000 198 aa5□□□□□ -1.61
SDF2-206ENST00000587788 KCNN3Q9UGI6 736 aa5□□□□□ -1.61
SDF2-206ENST00000587788 SHPKQ9UHJ6 478 aa5□□□□□ -1.61
SDF2-206ENST00000587788 EDARQ9UNE0 448 aa5□□□□□ -1.61
SDF2-206ENST00000587788 TIMM10BQ9Y5J6 103 aa5□□□□□ -1.61
SDF2-206ENST00000587788 IGKV3D-15A0A087WSY6 115 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TRGV5A0A0B4J1U4 118 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 MEIS3P1A6NDR6 274 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR6C6A6NF89 314 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TMEM235A6NFC5 223 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 LRRC3CA6NJW4 275 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 LEUTXA8MZ59 168 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 PRSS44E7EML9 344 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 G3V3Y1 287 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 M0R135 149 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TNFSF11O14788 317 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 SMAD9O15198 467 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 TPD52L2O43399 206 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 CYTIPO60759 359 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 CRTAPO75718 401 aaPredicted RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 TOXO94900 526 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 FARS2O95363 451 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 SYNGR4O95473 234 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 MPC2O95563 127 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 DUS4LO95620 317 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 MPIG6BO95866 241 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 F10P00742 488 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 CRYABP02511 175 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 HOXD4P09016 255 aaPredicted RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 RFPL3SP0C7P2 107 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZNF35P13682 527 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ABOP16442 354 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 CPT2P23786 658 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZBTB25P24278 435 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 PMELP40967 661 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR3A2P47893 321 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 H2BFSP57053 126 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ERVFRD-1P60508 538 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TLE1Q04724 770 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 KLRB1Q12918 225 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 DHRS2Q13268 280 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ARFRP1Q13795 201 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 EXOSC2Q13868 293 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZNF345Q14585 488 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 KRTAP27-1Q3LI81 207 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 MOGAT2Q3SYC2 334 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ABLIM2Q6H8Q1 611 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR10K2Q6IF99 312 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 Q6ZS92 163 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 AAED1Q7RTV5 226 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TMED4Q7Z7H5 227 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 DPPA2Q7Z7J5 298 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 SLC51BQ86UW2 128 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 HOGA1Q86XE5 327 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TMEM251Q8N6I4 163 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TMEM185AQ8NFB2 350 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 SEMA6DQ8NFY4 1073 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR51T1Q8NGJ9 327 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR52B4Q8NGK2 314 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR13C8Q8NGS7 320 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR5H2Q8NGV7 314 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR6K3Q8NGY3 331 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 OR1F12Q8NHA8 337 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 SCARB1Q8WTV0 552 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 RELTQ969Z4 430 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZNF799Q96GE5 643 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 C1orf147Q96MC9 270 aaPredicted RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZNF385AQ96PM9 386 aaKnown RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 GAL3ST1Q99999 423 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 DHRS9Q9BPW9 319 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 LINC00470Q9BZP3 86 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TINAGL1Q9GZM7 467 aaPredicted RBP4.99□□□□□ -1.61
SDF2-206ENST00000587788 MFFQ9GZY8 342 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 METTL9Q9H1A3 318 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 KCNK15Q9H427 330 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 LDAHQ9H6V9 325 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 ZDHHC11Q9H8X9 412 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 GLRX2Q9NS18 164 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 PLEK2Q9NYT0 353 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 KCNK7Q9Y2U2 307 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 CFAP46Q8IYW2 2715 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 FREM3P0C091 2139 aa4.99□□□□□ -1.61
SDF2-206ENST00000587788 FXYD6-FXYD2A0A087WZ82 144 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 C9orf170A2RU37 121 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 PINLYPA6NC86 204 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 ZNF716A6NP11 495 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 AHRRA9YTQ3 701 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 F5H5K5 113 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 MFNGO00587 321 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 XRCC2O43543 280 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 SYNGR3O43761 229 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 SSX5O60225 188 aa4.98□□□□□ -1.61
SDF2-206ENST00000587788 IGHG3P01860 377 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms